RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 ENGASEQ8NFI3 743 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ZNF560Q96MR9 790 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 CLSTN3Q9BQT9 956 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 APOL5Q9BWW9 433 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 S1PR5Q9H228 398 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 EPHX3Q9H6B9 360 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ITGA11Q9UKX5 1188 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 DSEQ9UL01 958 aa12.24□□□□□ -0.45
SLC28A1-202ENST00000338602 ANO9A1A5B4 782 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 M0QZQ0 153 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 PIRO00625 290 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 ELF1P32519 619 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 MRE11P49959 708 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 LILRA4P59901 499 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 UBE2HP62256 183 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 RBP5P82980 135 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 PNOCQ13519 176 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 MYBPC2Q14324 1141 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 CTXN3Q4LDR2 81 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 LILRA6Q6PI73 481 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 C15orf39Q6ZRI6 1047 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 RTL10Q7L3V2 364 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 CBWD2Q8IUF1 395 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 EFCAB13Q8IY85 973 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 GJD3Q8N144 294 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 GUF1Q8N442 669 aaKnown RBP12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 CMASQ8NFW8 434 aaPredicted RBP12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 PIDD1Q9HB75 910 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 ZDHHC7Q9NXF8 308 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 FRMD4BQ9Y2L6 1034 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 CDY1Q9Y6F8 540 aa12.23□□□□□ -0.45
SLC28A1-202ENST00000338602 TCF20Q9UGU0 1960 aaKnown RBP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 CCDC195A0A1B0GUA6 201 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 KRT19P08727 400 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 SPATA31D3P0C874 917 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 TNNI1P19237 187 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 TYMPP19971 482 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 IGFBP6P24592 240 aaPredicted RBP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 AARSP49588 968 aaKnown RBP eCLIP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 PSMD6Q15008 389 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 SPATA31D4Q6ZUB0 917 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 GPR149Q86SP6 731 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 LRRC52Q8N7C0 313 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 ZSWIM2Q8NEG5 633 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 TMEM174Q8WUU8 243 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 SUSD6Q92537 303 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 SENP8Q96LD8 212 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 INTS13Q9NVM9 706 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 AGAP1Q9UPQ3 857 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 NR2E1Q9Y466 385 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 REV3LO60673 3130 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
SLC28A1-202ENST00000338602 OR6C75A6NL08 312 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 KPNA7A9QM74 516 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 CYB561D2O14569 222 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 XYLBO75191 536 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ZMYND10O75800 440 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 OAZ2O95190 189 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 NR3C1P04150 777 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ITGB3P05106 788 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 DLATP10515 647 aaKnown RBP12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 PPP1R2P41236 205 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 AP3M2P53677 418 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ARPP19P56211 112 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ZP2Q05996 745 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 CYP24A1Q07973 514 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 MYO1EQ12965 1108 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 STIM1Q13586 685 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 TPGS2Q68CL5 300 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 OVOS1Q6IE37 1185 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 SLC8B1Q6J4K2 584 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 ZNF461Q8TAF7 563 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 MTMR12Q9C0I1 747 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 MAFFQ9ULX9 164 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.45
SLC28A1-202ENST00000338602 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms