RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 IGSF21Q96ID5 467 aa13.55□□□□□ -0.24
PRIM1-201ENST00000338193 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
PRIM1-201ENST00000338193 XYLT2Q9H1B5 865 aa13.55□□□□□ -0.24
PRIM1-201ENST00000338193 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
PRIM1-201ENST00000338193 POLIQ9UNA4 740 aa13.55□□□□□ -0.24
PRIM1-201ENST00000338193 C5orf67F2Z3F1 127 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 AP5Z1O43299 807 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 HLA-DRAP01903 254 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 TNNC2P02585 160 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 KRT19P08727 400 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 IRS1P35568 1242 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 FMO5P49326 533 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 ERVFC1P60507 584 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 BIRC3Q13489 604 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 SPPL3Q8TCT6 385 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 TUBGCP2Q9BSJ2 902 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 NAT10Q9H0A0 1025 aaKnown RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 VPS16Q9H269 839 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 ZNF576Q9H609 170 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
PRIM1-201ENST00000338193 TIMM13Q9Y5L4 95 aaPredicted RBP13.54□□□□□ -0.24
PRIM1-201ENST00000338193 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 HCRTO43612 131 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 GNA14O95837 355 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 LILRA4P59901 499 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 FUT10Q6P4F1 479 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 AJAP1Q9UKB5 411 aaPredicted RBP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
PRIM1-201ENST00000338193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRIM1-201ENST00000338193 TADA2AO75478 443 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 AFPP02771 609 aaKnown RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 RPL9P32969 192 aaKnown RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 RAP1GAPP47736 663 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 KLK7P49862 253 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 MXI1P50539 228 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 FXR1P51114 621 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 CDR1P51861 262 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 MYL7Q01449 175 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 ENPEPQ07075 957 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 GPM6BQ13491 265 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 NCOA4Q13772 614 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 ADGRE1Q14246 886 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 MAN2A1Q16706 1144 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 VWA3BQ502W6 1294 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 TATDN2Q93075 761 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 HPDLQ96IR7 371 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 UROC1Q96N76 676 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 NAP1L5Q96NT1 182 aaPredicted RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
PRIM1-201ENST00000338193 NUB1Q9Y5A7 615 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
PRIM1-201ENST00000338193 H3BNC9 293 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 PHACTR2O75167 634 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 SLC9A1P19634 815 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 EEF1GP26641 437 aaKnown RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 RBP5P82980 135 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 CCDC142Q17RM4 750 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 KRT39Q6A163 491 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 KAT5Q92993 513 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms