RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 IDI2Q9BXS1 227 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 MYO9BQ13459 2157 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 DIAPH2O60879 1101 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 PHKA2P46019 1235 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 CDH6P55285 790 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 RHOT1Q8IXI2 618 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 OR6B3Q8NGW1 331 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 PRPF31Q8WWY3 499 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 COPS5Q92905 334 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 SNF8Q96H20 258 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 RIT2Q99578 217 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 CYP26B1Q9NR63 512 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 DNPEPQ9ULA0 475 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 UBE4BO95155 1302 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 TXNDC9O14530 226 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 ATP2A2P16615 1042 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 DESP17661 470 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 SCTRP47872 440 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 FMO1Q01740 532 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 CDR2Q01850 454 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 DRP2Q13474 957 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 HADHQ16836 314 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 ARHGEF18Q6ZSZ5 1173 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 C3orf62Q6ZUJ4 267 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 LRRC57Q8N9N7 239 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 MCPH1Q8NEM0 835 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 ATL2Q8NHH9 583 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 MTFR1LQ9H019 292 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 TMEM8AQ9HCN3 771 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 PNMA3Q9UL41 463 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 STRCP1A6NGW2 1772 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 CCDC160A6NGH7 325 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
HPS4-201ENST00000336873 KIAA0391O15091 583 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 KRT3P12035 628 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 TCF4P15884 667 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 MAGEA4P43358 317 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 JAK3P52333 1124 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 BPIFB4P59827 614 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 DHX34Q14147 1143 aaKnown RBP8.7□□□□□ -1.02
HPS4-201ENST00000336873 KCTD2Q14681 263 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 FAM47CQ5HY64 1035 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 FYB2Q5VWT5 728 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 CYB5D1Q6P9G0 228 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 MFSD7Q6UXD7 560 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 TRPM8Q7Z2W7 1104 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 PLEKHO2Q8TD55 490 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 UBN1Q9NPG3 1134 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 PCDHB2Q9Y5E7 798 aa8.7□□□□□ -1.02
HPS4-201ENST00000336873 IGKV6D-41A0A0C4DH26 115 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 DKC1O60832 514 aaKnown RBP eCLIP8.69□□□□□ -1.02
HPS4-201ENST00000336873 TOM1L1O75674 476 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 DGAT1O75907 488 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 MT-ND3P03897 115 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 KRT4P19013 534 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ADORA2BP29275 332 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 NT5C2P49902 561 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 MMP14P50281 582 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ZNF667Q5HYK9 610 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ACAD10Q6JQN1 1059 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 C11orf63Q6NUN7 778 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 TMEM35BQ8NCS4 154 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 GMCL1P1Q8NEA9 526 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 FAF2Q96CS3 445 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CCDC124Q96CT7 223 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 SPATA33Q96N06 139 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 MKNK1Q9BUB5 465 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CNOT10Q9H9A5 744 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 PXMP2Q9NR77 195 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 HAO1Q9UJM8 370 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 SMCHD1A6NHR9 2005 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 RIPK2O43353 540 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CST3P01034 146 aaPredicted RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 TAS2R40P59535 323 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 FASTKD3Q14CZ7 662 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 R3HDM1Q15032 1099 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 STYK1Q6J9G0 422 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CFAP61Q8NHU2 1237 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 HES6Q96HZ4 224 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ADPGKQ9BRR6 497 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 UNKQ9C0B0 810 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 TRABDQ9H4I3 376 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ACAD9Q9H845 621 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 METTL5Q9NRN9 209 aaKnown RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 GTF3C4Q9UKN8 822 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms