RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 C1orf127Q8N9H9 656 aa17.05■□□□□ 0.32
MRPL55-202ENST00000336300 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
MRPL55-202ENST00000336300 CLEC1BQ9P126 229 aa17.05■□□□□ 0.32
MRPL55-202ENST00000336300 BARX2Q9UMQ3 279 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-202ENST00000336300 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 BIN1O00499 593 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 PHACTR2O75167 634 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 TBX10O75333 385 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 GLP2RO95838 553 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 EPCAMP16422 314 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 RPL17P18621 184 aaKnown RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 AARSP49588 968 aaKnown RBP eCLIP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 WNT7BP56706 349 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 FKBP3Q00688 224 aaKnown RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 YWHAHQ04917 246 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 DLX2Q07687 328 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 MORC3Q14149 939 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 PTCRAQ6ISU1 281 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 ZNF280DQ6N043 979 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 CES5AQ6NT32 575 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 INTS8Q75QN2 995 aaKnown RBP17.04■□□□□ 0.32
MRPL55-202ENST00000336300 GLYCTKQ8IVS8 523 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 VN1R2Q8NFZ6 395 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 SENP8Q96LD8 212 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 CLSTN3Q9BQT9 956 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 CLSTN2Q9H4D0 955 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 PLEKHA4Q9H4M7 779 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
MRPL55-202ENST00000336300 UNC80Q8N2C7 3258 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 BICDL2A1A5D9 508 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 CYB561D2O14569 222 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 PPEF2O14830 753 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 TGM5O43548 720 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
MRPL55-202ENST00000336300 TYMPP19971 482 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 CCNE1P24864 410 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 OR1D2P34982 312 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 ITIH3Q06033 890 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 SMAD4Q13485 552 aaKnown RBP17.03■□□□□ 0.32
MRPL55-202ENST00000336300 TRPC3Q13507 836 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 CLUL1Q15846 466 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 CTXN3Q4LDR2 81 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 TRAPPC11Q7Z392 1133 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 OR5B17Q8NGF7 314 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-202ENST00000336300 TMC2Q8TDI7 906 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 MSLNLQ96KJ4 702 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
MRPL55-202ENST00000336300 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 ATG2AQ2TAZ0 1938 aa17.03■□□□□ 0.32
MRPL55-202ENST00000336300 IKBKBO14920 756 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 MBD3O95983 291 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 CASP4P49662 377 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
MRPL55-202ENST00000336300 ENPEPQ07075 957 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 BFSP1Q12934 665 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 BIRC3Q13489 604 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 RAB33AQ14088 237 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 MRPL58Q14197 206 aaKnown RBP17.02■□□□□ 0.32
MRPL55-202ENST00000336300 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 ANKRD40Q6AI12 368 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 OVOS1Q6IE37 1185 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 THEM5Q8N1Q8 247 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 TMEM130Q8N3G9 435 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 MKNK1Q9BUB5 465 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 SFXN1Q9H9B4 322 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 MAN1C1Q9NR34 630 aa17.02■□□□□ 0.32
MRPL55-202ENST00000336300 TIMM13Q9Y5L4 95 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-202ENST00000336300 GRXCR2A6NFK2 248 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 SPTLC1O15269 473 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 HUS1O60921 280 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 AKAP3O75969 853 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 OAZ2O95190 189 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 ELF1P32519 619 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 KCNQ1P51787 676 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 VAMP7P51809 220 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 ARPP19P56211 112 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 CLDN10P78369 228 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 SLC8B1Q6J4K2 584 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 KLHL10Q6JEL2 608 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 KREMEN2Q8NCW0 462 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 FBXL5Q9UKA1 691 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 ANK1P16157 1881 aa17.01■□□□□ 0.31
MRPL55-202ENST00000336300 PTPRJQ12913 1337 aa17■□□□□ 0.31
MRPL55-202ENST00000336300 OR6C75A6NL08 312 aa17■□□□□ 0.31
MRPL55-202ENST00000336300 LRRIQ3A6PVS8 624 aaPredicted RBP17■□□□□ 0.31
MRPL55-202ENST00000336300 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
MRPL55-202ENST00000336300 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
MRPL55-202ENST00000336300 MBTPS2O43462 519 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms