RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 KRT10P13645 584 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 GABPB1Q06547 395 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 FOXR1Q6PIV2 292 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 MPZL3Q6UWV2 235 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ILDR2Q71H61 639 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PRELID2Q8N945 189 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 SGSM3Q96HU1 749 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 MAML3Q96JK9 1138 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 CPSF3Q9UKF6 684 aaKnown RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ATP8A1Q9Y2Q0 1164 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ANKRD65E5RJM6 399 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PPEF2O14830 753 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 RARAP10276 462 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 CCNA1P78396 465 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 DR1Q01658 176 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PNMA8AQ86V59 439 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 EMC1Q8N766 993 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 RPF1Q9H9Y2 349 aaKnown RBP13.41□□□□□ -0.26
LIMK1-201ENST00000336180 KIAA1586Q9HCI6 787 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
LIMK1-201ENST00000336180 MCM3P25205 808 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 ECHS1P30084 290 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 PTENP60484 403 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 PAK2Q13177 524 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 HIC1Q14526 733 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 SMTNL2Q2TAL5 461 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 CFAP58Q5T655 872 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 UBL4BQ8N7F7 174 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 GOLGA6L1Q8N7Z2 621 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 C2orf69Q8N8R5 385 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 MCEEQ96PE7 176 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 GTF3C4Q9UKN8 822 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 R3HDM2Q9Y2K5 976 aaKnown RBP13.4□□□□□ -0.26
LIMK1-201ENST00000336180 MYO1FO00160 1098 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 ACKR2O00590 384 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 HSF2BPO75031 334 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 GRAP2O75791 330 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 CYP1A2P05177 515 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 AKAP5P24588 427 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 HPDP32754 393 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-201ENST00000336180 PEX5P50542 639 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-201ENST00000336180 GTF2A2P52657 109 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 EFNA5P52803 228 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 TUBB4BP68371 445 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 ADCY2Q08462 1091 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 ACVR2BQ13705 512 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 GRIK4Q16099 956 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 TTMPQ5BVD1 217 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 SPRYD7Q5W111 196 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
LIMK1-201ENST00000336180 IGKV6-21A0A0C4DH24 114 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 ANXA13P27216 316 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 POLR2BP30876 1174 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 NOMO3P69849 1222 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RNF14Q9UBS8 474 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 SIX4Q9UIU6 781 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 PLAAQ9Y263 795 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 F8VP50 259 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 ASS1P00966 412 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 PIGRP01833 764 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 GZMAP12544 262 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RAB6CQ53S08 254 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 KCNT1Q5JUK3 1230 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 CEP85LQ5SZL2 805 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 EIF2AQ9BY44 585 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RAB6CQ9H0N0 254 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 FEZ2Q9UHY8 353 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 DYNLT1P63172 113 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 MCL1Q07820 350 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 HP1BP3Q5SSJ5 553 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 CCDC137Q6PK04 289 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 ZPBP2Q6X784 338 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 C12orf29Q8N999 325 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms