RNA–Protein interactions for RNA: ENST00000332281.5

SNAI3-201, Transcript of snail family transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI3, Length 1,732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3-201ENST00000332281 CYP1A1P04798 512 aaPredicted RBP20.29■□□□□ 0.84
SNAI3-201ENST00000332281 KRT19P08727 400 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
SNAI3-201ENST00000332281 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
SNAI3-201ENST00000332281 PAFAH1B1P43034 410 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 ZNF667Q5HYK9 610 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 CCSAPQ6IQ19 270 aaPredicted RBP20.29■□□□□ 0.84
SNAI3-201ENST00000332281 CXorf38Q8TB03 319 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 ABCB6Q9NP58 842 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 CISHQ9NSE2 258 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 CTTNBP2NLQ9P2B4 639 aa20.29■□□□□ 0.84
SNAI3-201ENST00000332281 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
SNAI3-201ENST00000332281 ITGB3P05106 788 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 CYP1A2P05177 515 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 CST5P28325 142 aaPredicted RBP20.28■□□□□ 0.84
SNAI3-201ENST00000332281 ASPAP45381 313 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 YARSP54577 528 aaKnown RBP20.28■□□□□ 0.84
SNAI3-201ENST00000332281 RBM10P98175 930 aaKnown RBP20.28■□□□□ 0.84
SNAI3-201ENST00000332281 MTFR1Q15390 333 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 NBPF20Q3BBV1 942 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 CCDC181Q5TID7 509 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
SNAI3-201ENST00000332281 NT5DC3Q86UY8 548 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 TMEM40Q8WWA1 233 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 TRIM11Q96F44 468 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 BCO2Q9BYV7 579 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 PDCL3Q9H2J4 239 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 STXBP5LQ9Y2K9 1186 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 TRIP11Q15643 1979 aa20.28■□□□□ 0.84
SNAI3-201ENST00000332281 PDE2AO00408 941 aaPredicted RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 STAU1O95793 577 aaKnown RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 CXCR5P32302 372 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 CTCFP49711 727 aaPredicted RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 CENPCQ03188 943 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 CFAP221Q4G0U5 840 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 C11orf63Q6NUN7 778 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 RSPH3Q86UC2 560 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 PBKQ96KB5 322 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 CELF4Q9BZC1 486 aaKnown RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 TRIM6Q9C030 488 aaPredicted RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 FAM124BQ9H5Z6 455 aaPredicted RBP20.27■□□□□ 0.84
SNAI3-201ENST00000332281 UVRAGQ9P2Y5 699 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 AMFRQ9UKV5 643 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 COG5Q9UP83 839 aa20.27■□□□□ 0.84
SNAI3-201ENST00000332281 M0QZ92 97 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 MYBL1P10243 752 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 P4HA1P13674 534 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 H2AFXP16104 143 aaPredicted RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 ZSCAN20P17040 1043 aaPredicted RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 WDR72Q3MJ13 1102 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 SESTD1Q86VW0 696 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 ZNF653Q96CK0 615 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 SNX27Q96L92 541 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 PSMB7Q99436 277 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 EIF2AQ9BY44 585 aaKnown RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 ARGLU1Q9NWB6 273 aaPredicted RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 DPP3Q9NY33 737 aa20.27■□□□□ 0.83
SNAI3-201ENST00000332281 PACSIN2Q9UNF0 486 aaPredicted RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 PIN4Q9Y237 131 aaKnown RBP20.27■□□□□ 0.83
SNAI3-201ENST00000332281 THAP12O43422 761 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 TUBBP07437 444 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 CCL5P13501 91 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 NSFP46459 744 aaKnown RBP20.26■□□□□ 0.83
SNAI3-201ENST00000332281 ACLYP53396 1101 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 RBP5P82980 135 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 FAM47CQ5HY64 1035 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 FBXO38Q6PIJ6 1188 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 ZNF606Q8WXB4 792 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 KIF12Q96FN5 646 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 HES6Q96HZ4 224 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 VCPIP1Q96JH7 1222 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 DEFB118Q96PH6 123 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 TSPAN18Q96SJ8 248 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 RNF208Q9H0X6 261 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 GOLPH3Q9H4A6 298 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 SNTG2Q9NY99 539 aa20.26■□□□□ 0.83
SNAI3-201ENST00000332281 PDCD11Q14690 1871 aaKnown RBP20.26■□□□□ 0.83
SNAI3-201ENST00000332281 CALCAP01258 141 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 CD58P19256 250 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 MRPS6P82932 125 aaKnown RBP20.25■□□□□ 0.83
SNAI3-201ENST00000332281 RPAINQ86UA6 219 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 MCOLN2Q8IZK6 566 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 NOA1Q8NC60 698 aaKnown RBP20.25■□□□□ 0.83
SNAI3-201ENST00000332281 ARRDC4Q8NCT1 418 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 SELENOOQ9BVL4 669 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 CYP3A43Q9HB55 503 aa20.25■□□□□ 0.83
SNAI3-201ENST00000332281 AVENQ9NQS1 362 aaPredicted RBP20.25■□□□□ 0.83
SNAI3-201ENST00000332281 NXF1Q9UBU9 619 aaKnown RBP20.25■□□□□ 0.83
SNAI3-201ENST00000332281 WEE2P0C1S8 567 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 POLR2BP30876 1174 aaKnown RBP20.24■□□□□ 0.83
SNAI3-201ENST00000332281 NOMO3P69849 1222 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 GDF6Q6KF10 455 aaPredicted RBP20.24■□□□□ 0.83
SNAI3-201ENST00000332281 SERINC5Q86VE9 423 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 CYFIP2Q96F07 1278 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 CNTN3Q9P232 1028 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 AGAP1Q9UPQ3 857 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 TRPV2Q9Y5S1 764 aa20.24■□□□□ 0.83
SNAI3-201ENST00000332281 BRCA2P51587 3418 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms