RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RALGAPA2Q2PPJ7 1873 aa15.94■□□□□ 0.14
TPM3-205ENST00000328159 C17orf102A2RUQ5 167 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 TMEM88BA6NKF7 163 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 TREHO43280 583 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 DUSP11O75319 330 aaKnown RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 ZMYND10O75800 440 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 COMTP21964 271 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 PSMC4P43686 418 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 PURAQ00577 322 aaKnown RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 PCBP1Q15365 356 aaKnown RBP eCLIP15.93■□□□□ 0.146e-17■■□□□ 14.2
TPM3-205ENST00000328159 DCAF12L1Q5VU92 463 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 PAXIP1Q6ZW49 1069 aaPredicted RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 PHF13Q86YI8 300 aaPredicted RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 CD302Q8IX05 232 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 TMEM130Q8N3G9 435 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 UBL4BQ8N7F7 174 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 SMC1BQ8NDV3 1235 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 CXorf38Q8TB03 319 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 FAXDC2Q96IV6 333 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 BTBD6Q96KE9 485 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 KRT12Q99456 494 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 ZSWIM1Q9BR11 485 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 BCO2Q9BYV7 579 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 ARHGAP39Q9C0H5 1083 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 DMGDHQ9UI17 866 aaKnown RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 TTC7AQ9ULT0 858 aaPredicted RBP15.93■□□□□ 0.14
TPM3-205ENST00000328159 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
TPM3-205ENST00000328159 SASH3O75995 380 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 CYBAP13498 195 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 RRM1P23921 792 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 ATICP31939 592 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 MRPS25P82663 173 aaKnown RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 ZNF200P98182 395 aaPredicted RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 SLC7A5Q01650 507 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 LIN9Q5TKA1 542 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 MFSD14CQ5VZR4 134 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 CCNI2Q6ZMN8 369 aaPredicted RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 NT5DC4Q86YG4 428 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 VCPIP1Q96JH7 1222 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 WNT8AQ9H1J5 351 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 STIM2Q9P246 746 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 L1RE1Q9UN81 338 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 TRIP11Q15643 1979 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 MYADML2A6NDP7 307 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 KPNA6O60684 536 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 EIF4BP23588 611 aaKnown RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 BRD2P25440 801 aaKnown RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 POLR2BP30876 1174 aaKnown RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 RAP1GAPP47736 663 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 LACTBP83111 547 aaPredicted RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 WDR72Q3MJ13 1102 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 ZNF394Q53GI3 561 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 CYP4F22Q6NT55 531 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 C7orf31Q8N865 590 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 TRIB2Q92519 343 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 ALG3Q92685 438 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 CD101Q93033 1021 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 C11orf70Q9BRQ4 267 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 VRTNQ9H8Y1 702 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 GPBP1L1Q9HC44 474 aaPredicted RBP15.92■□□□□ 0.14
TPM3-205ENST00000328159 ADAM22Q9P0K1 906 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 ITGA11Q9UKX5 1188 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 GABRQQ9UN88 632 aa15.92■□□□□ 0.14
TPM3-205ENST00000328159 CCDC188H7C350 402 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 KRIT1O00522 736 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 SPOPO43791 374 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 LSM8O95777 96 aaKnown RBP15.91■□□□□ 0.14
TPM3-205ENST00000328159 C6orf222P0C671 652 aaPredicted RBP15.91■□□□□ 0.14
TPM3-205ENST00000328159 GNAT1P11488 350 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 CTNNA2P26232 953 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 HOXC8P31273 242 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 GUCY2FP51841 1108 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 GJA9P57773 515 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 C1QBPQ07021 282 aaKnown RBP15.91■□□□□ 0.14
TPM3-205ENST00000328159 SNX17Q15036 470 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 NOTUMQ6P988 496 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 HDXQ7Z353 690 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 KLHL7Q8IXQ5 586 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 KRT35Q92764 455 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
TPM3-205ENST00000328159 AP1M1Q9BXS5 423 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
TPM3-205ENST00000328159 SDCBP2Q9H190 292 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 PLEKHA5Q9HAU0 1116 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 SNTG2Q9NY99 539 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 ANAPC7Q9UJX3 599 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 AGAP1Q9UPQ3 857 aa15.91■□□□□ 0.14
TPM3-205ENST00000328159 MAP2K7O14733 419 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 KIF3CO14782 793 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 FGGP02679 453 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 AXLP30530 894 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 MARCKSL1P49006 195 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 FLT3LGP49771 235 aa15.9■□□□□ 0.14
TPM3-205ENST00000328159 PEX5P50542 639 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms