RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
CCDC107-201ENST00000327351 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
CCDC107-201ENST00000327351 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
CCDC107-201ENST00000327351 CITO14578 2027 aa18.37■□□□□ 0.53
CCDC107-201ENST00000327351 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
CCDC107-201ENST00000327351 SSU72P8A0A1W2PR75 194 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 ZNF623O75123 536 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 GFPT2O94808 682 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
CCDC107-201ENST00000327351 KCNE1P15382 129 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 EIF4A3P38919 411 aaKnown RBP18.36■□□□□ 0.53
CCDC107-201ENST00000327351 PRKCIP41743 596 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 ARID5AQ03989 594 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 SPOPLQ6IQ16 392 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 FMNL3Q8IVF7 1028 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 CCAR2Q8N163 923 aaKnown RBP18.36■□□□□ 0.53
CCDC107-201ENST00000327351 SHC3Q92529 594 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 YME1L1Q96TA2 773 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 ADAM2Q99965 735 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 DPP3Q9NY33 737 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 KLK14Q9P0G3 267 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 LRFN2Q9ULH4 789 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 NUB1Q9Y5A7 615 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 ADGRG1Q9Y653 693 aa18.36■□□□□ 0.53
CCDC107-201ENST00000327351 BZW2Q9Y6E2 419 aaKnown RBP18.36■□□□□ 0.53
CCDC107-201ENST00000327351 RALGAPA2Q2PPJ7 1873 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 NDUFA10O95299 355 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 ITGA4P13612 1032 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 CYLC1P35663 651 aaPredicted RBP18.35■□□□□ 0.53
CCDC107-201ENST00000327351 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 NOP14P78316 857 aaKnown RBP18.35■□□□□ 0.53
CCDC107-201ENST00000327351 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 ASTE1Q2TB18 679 aaPredicted RBP18.35■□□□□ 0.53
CCDC107-201ENST00000327351 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 FAM71AQ8IYT1 594 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 HACE1Q8IYU2 909 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 TMEM130Q8N3G9 435 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 LINC01599Q8WXQ3 324 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 TAF4BQ92750 862 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 CCDC42Q96M95 316 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 XYLT2Q9H1B5 865 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 SPTLC3Q9NUV7 552 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 PPP2R2CQ9Y2T4 447 aa18.35■□□□□ 0.53
CCDC107-201ENST00000327351 SMIM28A0A1B0GU29 152 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 EIF3CLB5ME19 914 aaKnown RBP18.34■□□□□ 0.53
CCDC107-201ENST00000327351 ITGB3P05106 788 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 KRT19P08727 400 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 CCDC172P0C7W6 258 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 RAB27AP51159 221 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 RBP5P82980 135 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 HTRA4P83105 476 aaPredicted RBP18.34■□□□□ 0.53
CCDC107-201ENST00000327351 CUL2Q13617 745 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 SLC24A5Q71RS6 500 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
CCDC107-201ENST00000327351 JAKMIP2Q96AA8 810 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 EIF3CQ99613 913 aaKnown RBP18.34■□□□□ 0.53
CCDC107-201ENST00000327351 DESI2Q9BSY9 194 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 IMPG2Q9BZV3 1241 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 HAUS4Q9H6D7 363 aa18.34■□□□□ 0.53
CCDC107-201ENST00000327351 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
CCDC107-201ENST00000327351 GBF1Q92538 1859 aa18.33■□□□□ 0.53
CCDC107-201ENST00000327351 A0A0U1RQF3 1178 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 USP27XA6NNY8 438 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 CCP110O43303 1012 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 ZSCAN12O43309 604 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 SLC34A2O95436 690 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 SKIP12755 728 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 ATICP31939 592 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 ZNF699Q32M78 642 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 TDRD12Q587J7 1177 aaKnown RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 ACRBPQ8NEB7 543 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 BEST2Q8NFU1 509 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 C18orf25Q96B23 403 aaPredicted RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 UBQLN1Q9UMX0 589 aaKnown RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 AGAP1Q9UPQ3 857 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 GIT1Q9Y2X7 761 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 REXO2Q9Y3B8 237 aaKnown RBP18.33■□□□□ 0.52
CCDC107-201ENST00000327351 PCDHB7Q9Y5E2 793 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 TRIP11Q15643 1979 aa18.33■□□□□ 0.52
CCDC107-201ENST00000327351 PTPRSQ13332 1948 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 LCHNA4D1U4 455 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 MEIS3P2A8K0S8 358 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 AKR1B10O60218 316 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 LCA5LO95447 670 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 STAU1O95793 577 aaKnown RBP18.32■□□□□ 0.52
CCDC107-201ENST00000327351 CCDC175P0C221 793 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
CCDC107-201ENST00000327351 ANXA13P27216 316 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 POLR2BP30876 1174 aaKnown RBP18.32■□□□□ 0.52
CCDC107-201ENST00000327351 KIF11P52732 1056 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 TAP1Q03518 808 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 PTK2Q05397 1052 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 GRIN2CQ14957 1233 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms