RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 PROB1E7EW31 1015 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 PRRG1O14668 218 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 SYN3O14994 580 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 XYLBO75191 536 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 FAM13AO94988 1023 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 ADRB2P07550 413 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 LRPAP1P30533 357 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 HOXC13P31276 330 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 DDIT3P35638 169 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 LONP1P36776 959 aaKnown RBP8.84□□□□□ -0.99
CCNC-201ENST00000326298 VIPR2P41587 438 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 AARSP49588 968 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCNC-201ENST00000326298 GTF2BQ00403 316 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 TWF1Q12792 350 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 GRM2Q14416 872 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 FAM78AQ5JUQ0 283 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 ELMSAN1Q6PJG2 1045 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 BRAPQ7Z569 592 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 ATAD1Q8NBU5 361 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 OR10T2Q8NGX3 314 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 KCNN1Q92952 543 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 HPS3Q969F9 1004 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 CALML4Q96GE6 196 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 RTP3Q9BQQ7 232 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 HEBP1Q9NRV9 189 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 KCND2Q9NZV8 630 aa8.84□□□□□ -0.99
CCNC-201ENST00000326298 SPTBN2O15020 2390 aa8.83□□□□□ -1
CCNC-201ENST00000326298 CACNA1AO00555 2505 aa8.83□□□□□ -1
CCNC-201ENST00000326298 OGTO15294 1046 aa8.83□□□□□ -1
CCNC-201ENST00000326298 PPP1R37O75864 691 aa8.83□□□□□ -1
CCNC-201ENST00000326298 MCM2P49736 904 aa8.83□□□□□ -1
CCNC-201ENST00000326298 LILRA4P59901 499 aa8.83□□□□□ -1
CCNC-201ENST00000326298 DUSP4Q13115 394 aa8.83□□□□□ -1
CCNC-201ENST00000326298 FZD5Q13467 585 aa8.83□□□□□ -1
CCNC-201ENST00000326298 CCDC142Q17RM4 750 aa8.83□□□□□ -1
CCNC-201ENST00000326298 SLC44A4Q53GD3 710 aa8.83□□□□□ -1
CCNC-201ENST00000326298 PDXDC1Q6P996 788 aa8.83□□□□□ -1
CCNC-201ENST00000326298 EFCAB13Q8IY85 973 aa8.83□□□□□ -1
CCNC-201ENST00000326298 STKLD1Q8NE28 680 aa8.83□□□□□ -1
CCNC-201ENST00000326298 PJA1Q8NG27 643 aa8.83□□□□□ -1
CCNC-201ENST00000326298 LRRC3BQ96PB8 259 aa8.83□□□□□ -1
CCNC-201ENST00000326298 MSTO1Q9BUK6 570 aa8.83□□□□□ -1
CCNC-201ENST00000326298 STRA6Q9BX79 667 aa8.83□□□□□ -1
CCNC-201ENST00000326298 LRRC3Q9BY71 257 aa8.83□□□□□ -1
CCNC-201ENST00000326298 CCSER1Q9C0I3 900 aa8.83□□□□□ -1
CCNC-201ENST00000326298 UPF2Q9HAU5 1272 aaKnown RBP8.83□□□□□ -1
CCNC-201ENST00000326298 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
CCNC-201ENST00000326298 SIT1Q9Y3P8 196 aa8.83□□□□□ -1
CCNC-201ENST00000326298 TSC2P49815 1807 aa8.83□□□□□ -1
CCNC-201ENST00000326298 OAZ2O95190 189 aa8.82□□□□□ -1
CCNC-201ENST00000326298 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 POU2F2P09086 479 aa8.82□□□□□ -1
CCNC-201ENST00000326298 CPB1P15086 417 aa8.82□□□□□ -1
CCNC-201ENST00000326298 PTPN2P17706 415 aa8.82□□□□□ -1
CCNC-201ENST00000326298 STARD6P59095 220 aa8.82□□□□□ -1
CCNC-201ENST00000326298 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
CCNC-201ENST00000326298 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
CCNC-201ENST00000326298 SPATA1Q5VX52 437 aa8.82□□□□□ -1
CCNC-201ENST00000326298 C9orf57Q5W0N0 161 aa8.82□□□□□ -1
CCNC-201ENST00000326298 ZNF720Q7Z2F6 126 aa8.82□□□□□ -1
CCNC-201ENST00000326298 APBB1IPQ7Z5R6 666 aaPredicted RBP8.82□□□□□ -1
CCNC-201ENST00000326298 BEST2Q8NFU1 509 aa8.82□□□□□ -1
CCNC-201ENST00000326298 RASSF8Q8NHQ8 419 aa8.82□□□□□ -1
CCNC-201ENST00000326298 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
CCNC-201ENST00000326298 NXPE3Q969Y0 559 aa8.82□□□□□ -1
CCNC-201ENST00000326298 SENP8Q96LD8 212 aa8.82□□□□□ -1
CCNC-201ENST00000326298 DDX23Q9BUQ8 820 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 BACH2Q9BYV9 841 aa8.82□□□□□ -1
CCNC-201ENST00000326298 ZNF334Q9HCZ1 680 aaPredicted RBP8.82□□□□□ -1
CCNC-201ENST00000326298 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
CCNC-201ENST00000326298 HCRTO43612 131 aa8.82□□□□□ -1
CCNC-201ENST00000326298 LRG1P02750 347 aa8.82□□□□□ -1
CCNC-201ENST00000326298 TARSP26639 723 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 YWHAHQ04917 246 aaPredicted RBP8.82□□□□□ -1
CCNC-201ENST00000326298 TEAD2Q15562 447 aa8.82□□□□□ -1
CCNC-201ENST00000326298 ADALQ6DHV7 355 aa8.82□□□□□ -1
CCNC-201ENST00000326298 ZNF280DQ6N043 979 aa8.82□□□□□ -1
CCNC-201ENST00000326298 LRRTM3Q86VH5 581 aa8.82□□□□□ -1
CCNC-201ENST00000326298 TMC8Q8IU68 726 aa8.82□□□□□ -1
CCNC-201ENST00000326298 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
CCNC-201ENST00000326298 PDILTQ8N807 584 aa8.82□□□□□ -1
CCNC-201ENST00000326298 SHKBP1Q8TBC3 707 aa8.82□□□□□ -1
CCNC-201ENST00000326298 SAAL1Q96ER3 474 aa8.82□□□□□ -1
CCNC-201ENST00000326298 BORCS6Q96GS4 357 aa8.82□□□□□ -1
CCNC-201ENST00000326298 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
CCNC-201ENST00000326298 RPF1Q9H9Y2 349 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 PLEKHA5Q9HAU0 1116 aa8.82□□□□□ -1
CCNC-201ENST00000326298 AFF4Q9UHB7 1163 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 KCNH3Q9ULD8 1083 aa8.82□□□□□ -1
CCNC-201ENST00000326298 UBQLN1Q9UMX0 589 aaKnown RBP8.82□□□□□ -1
CCNC-201ENST00000326298 YIPF1Q9Y548 306 aa8.82□□□□□ -1
CCNC-201ENST00000326298 STYXL1Q9Y6J8 313 aa8.82□□□□□ -1
CCNC-201ENST00000326298 ANO9A1A5B4 782 aa8.81□□□□□ -1
CCNC-201ENST00000326298 PIRO00625 290 aa8.81□□□□□ -1
CCNC-201ENST00000326298 MYL4P12829 197 aa8.81□□□□□ -1
CCNC-201ENST00000326298 ELF1P32519 619 aa8.81□□□□□ -1
CCNC-201ENST00000326298 NUBP1P53384 320 aa8.81□□□□□ -1
CCNC-201ENST00000326298 MLF2Q15773 248 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms