RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 KDM1AO60341 852 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 GPD1P21695 349 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 PASD1Q8IV76 773 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 MYRIPQ8NFW9 859 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 OSMRQ99650 979 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 GIT1Q9Y2X7 761 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 SEPT4O43236 478 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 CIB2O75838 187 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 DDX5P17844 614 aaKnown RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 GEMIN4P57678 1058 aaKnown RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 TTC23LQ6PF05 361 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 SDCCAG8Q86SQ7 713 aaPredicted RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 IQANK1A0A1B0GTG1 560 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 NEMP1O14524 444 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 DEUP1Q05D60 604 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 CLMNQ96JQ2 1002 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
CCDC149-201ENST00000324309 DDX20Q9UHI6 824 aaKnown RBP13.5□□□□□ -0.25
CCDC149-201ENST00000324309 PSMD6Q15008 389 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 KLHDC7AQ5VTJ3 777 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.49□□□□□ -0.252e-14■■■■■ 43.3
CCDC149-201ENST00000324309 DHX35Q9H5Z1 703 aaKnown RBP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 MEIS2O14770 477 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 TRIM66O15016 1216 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 TOB1P50616 345 aaPredicted RBP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 BOLA3Q53S33 107 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 DYNLT1P63172 113 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 NME3Q13232 169 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 FRMD8Q9BZ67 464 aaPredicted RBP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
CCDC149-201ENST00000324309 TAF1BQ53T94 588 aaPredicted RBP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC149-201ENST00000324309 PDGFRAP16234 1089 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 TAC1P20366 129 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 DHX34Q14147 1143 aaKnown RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 NAB2Q15742 525 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 CCDC62Q6P9F0 684 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 UNC45BQ8IWX7 931 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 ACRBPQ8NEB7 543 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 DCLK3Q9C098 648 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 ELOVL4Q9GZR5 314 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PDE11AQ9HCR9 933 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 CYTH3O43739 400 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 CREB3O43889 395 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PAEPP09466 180 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PDK1Q15118 436 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 DPH5Q9H2P9 285 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 EBAG9O00559 213 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 STX2P32856 288 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 BFARQ9NZS9 450 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 EVI5O60447 810 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 FTCDO95954 541 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 YWHAHQ04917 246 aaPredicted RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 KRT33BQ14525 404 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 SLC7A14Q8TBB6 771 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 SEPT6Q14141 434 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 SKA2Q8WVK7 121 aaPredicted RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
CCDC149-201ENST00000324309 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
CCDC149-201ENST00000324309 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 PALMO75781 387 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 BST2Q10589 180 aaKnown RBP13.47□□□□□ -0.25
CCDC149-201ENST00000324309 GTF2H3Q13889 308 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 CENPPQ6IPU0 288 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 PDZD8Q8NEN9 1154 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 ARFGEF2Q9Y6D5 1785 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
CCDC149-201ENST00000324309 CDH6P55285 790 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 IRF5Q13568 498 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
CCDC149-201ENST00000324309 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms