RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 SHHQ15465 462 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 HERC6Q8IVU3 1022 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 CCDC150Q8NCX0 1101 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 PHOSPHO2Q8TCD6 241 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 DDX27Q96GQ7 796 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 KREMEN1Q96MU8 473 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 YME1L1Q96TA2 773 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 NIF3L1Q9GZT8 377 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 UBE2TQ9NPD8 197 aaPredicted RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 NLRC4Q9NPP4 1024 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 POLIQ9UNA4 740 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 CLSTN1O94985 981 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 ITGB1P05556 798 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 CASP14P31944 242 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 PNPLA4P41247 253 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 GCNT1Q02742 428 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 TRIM14Q14142 442 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 ZNF667Q5HYK9 610 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 CPLX3Q8WVH0 158 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 BAP1Q92560 729 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 NXF1Q9UBU9 619 aaKnown RBP20.09■□□□□ 0.81
CDK4-202ENST00000312990 DNAJC12Q9UKB3 198 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 CAPN11Q9UMQ6 739 aa20.09■□□□□ 0.81
CDK4-202ENST00000312990 A0A1W2PQJ5 194 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 KIF4AO95239 1232 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 RFX1P22670 979 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 OR1G1P47890 313 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 GOLGA8FQ08AF8 430 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 GOLGA8DPQ0D2H9 430 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 CUL2Q13617 745 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 BTG3Q14201 252 aaPredicted RBP20.08■□□□□ 0.81
CDK4-202ENST00000312990 IQCDQ96DY2 449 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 RNPC3Q96LT9 517 aaKnown RBP20.08■□□□□ 0.81
CDK4-202ENST00000312990 GPR88Q9GZN0 384 aa20.08■□□□□ 0.81
CDK4-202ENST00000312990 KPNA7A9QM74 516 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 NRP1O14786 923 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 B3GAT3O94766 335 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 PBX3P40426 434 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 SLC11A1P49279 550 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 AARSP49588 968 aaKnown RBP eCLIP20.07■□□□□ 0.8
CDK4-202ENST00000312990 JAM2P57087 298 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 RAPGEF1Q13905 1077 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 SV2CQ496J9 727 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 SCARA5Q6ZMJ2 495 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 PPFIBP1Q86W92 1011 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 HASPINQ8TF76 798 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 TMEM175Q9BSA9 504 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 BCO2Q9BYV7 579 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 EDEM3Q9BZQ6 932 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 IMPACTQ9P2X3 320 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 PRG3Q9Y2Y8 225 aaPredicted RBP20.07■□□□□ 0.8
CDK4-202ENST00000312990 SNX9Q9Y5X1 595 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
CDK4-202ENST00000312990 MYH10P35580 1976 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 MYO9BQ13459 2157 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 TMEM189-UBE2V1I3L0A0 370 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 GALTP07902 379 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 DCLRE1AQ6PJP8 1040 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 CACNA2D4Q7Z3S7 1137 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 FAXDC2Q96IV6 333 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 ZBED2Q9BTP6 218 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 UBE2OQ9C0C9 1292 aaKnown RBP20.07■□□□□ 0.8
CDK4-202ENST00000312990 SMYD3Q9H7B4 428 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 MARCH5Q9NX47 278 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 DAAM1Q9Y4D1 1078 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 INSL6Q9Y581 213 aa20.07■□□□□ 0.8
CDK4-202ENST00000312990 MFAP3LO75121 409 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 CAPN15O75808 1086 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 LINC00271P0C7V0 271 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 TBXAS1P24557 533 aaPredicted RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 RAP1GAPP47736 663 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 MFAP3P55082 362 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 ADKP55263 362 aaKnown RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 BCAR1P56945 870 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 TNNC1P63316 161 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 DRAP1Q14919 205 aaPredicted RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 ARHGAP44Q17R89 818 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 FAM109BQ6ICB4 259 aaPredicted RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 TMEM173Q86WV6 379 aaPredicted RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 UBR7Q8N806 425 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 TC2NQ8N9U0 490 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 PPP1R9BQ96SB3 815 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 RAD9AQ99638 391 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 STK33Q9BYT3 514 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 SDCBP2Q9H190 292 aa20.06■□□□□ 0.8
CDK4-202ENST00000312990 LUC7L2Q9Y383 392 aaKnown RBP20.06■□□□□ 0.8
CDK4-202ENST00000312990 TRANK1O15050 2925 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 F8VZ95 297 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 ALDH2P05091 517 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 WEE2P0C1S8 567 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 PNMA6AP0CW24 399 aaPredicted RBP20.05■□□□□ 0.8
CDK4-202ENST00000312990 BRCC3P46736 316 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 ZBED6P86452 979 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 CCDC173Q0VFZ6 552 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
CDK4-202ENST00000312990 E4F1Q66K89 784 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms