RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRPV1Q8NER1 839 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 CXorf38Q8TB03 319 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 DNAJB3Q8WWF6 145 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 FAXDC2Q96IV6 333 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 HHIPL1Q96JK4 782 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 BTBD6Q96KE9 485 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 KRT12Q99456 494 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 OSMRQ99650 979 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 POLIQ9UNA4 740 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 TREHO43280 583 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 RRM1P23921 792 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 SSTR3P32745 418 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-201ENST00000309469 FCGRTP55899 365 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 TMEM132DQ14C87 1099 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 PPP1R2P3Q6NXS1 205 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 PHF13Q86YI8 300 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-201ENST00000309469 UBL4BQ8N7F7 174 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 STIM2Q9P246 746 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 C2CD2Q9Y426 696 aa22.68■■□□□ 1.22
ATG4D-201ENST00000309469 DUSP11O75319 330 aaKnown RBP22.67■■□□□ 1.22
ATG4D-201ENST00000309469 NPTXRO95502 500 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ATICP31939 592 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 PSMC4P43686 418 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ZNF200P98182 395 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-201ENST00000309469 PURAQ00577 322 aaKnown RBP22.67■■□□□ 1.22
ATG4D-201ENST00000309469 WDR72Q3MJ13 1102 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 MAP9Q49MG5 647 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ZNF394Q53GI3 561 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 CD302Q8IX05 232 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ALG3Q92685 438 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 VCPIP1Q96JH7 1222 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 HINFPQ9BQA5 517 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ZSWIM1Q9BR11 485 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 BCO2Q9BYV7 579 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 WNT8AQ9H1J5 351 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ANK1P16157 1881 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 C17orf102A2RUQ5 167 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 LIN9Q5TKA1 542 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 SLC27A1Q6PCB7 646 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 HDXQ7Z353 690 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 NT5DC4Q86YG4 428 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 TMEM130Q8N3G9 435 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 CD101Q93033 1021 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 AP1M1Q9BXS5 423 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ARHGAP39Q9C0H5 1083 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 ADAM22Q9P0K1 906 aa22.67■■□□□ 1.22
ATG4D-201ENST00000309469 TMEM88BA6NKF7 163 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 KRIT1O00522 736 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 MAP2K7O14733 419 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 EIF4BP23588 611 aaKnown RBP22.66■■□□□ 1.22
ATG4D-201ENST00000309469 NOTUMQ6P988 496 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 KRT35Q92764 455 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 RNPC3Q96LT9 517 aaKnown RBP22.66■■□□□ 1.22
ATG4D-201ENST00000309469 C11orf70Q9BRQ4 267 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 VRTNQ9H8Y1 702 aa22.66■■□□□ 1.22
ATG4D-201ENST00000309469 CCDC188H7C350 402 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 GNAT1P11488 350 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 BRD2P25440 801 aaKnown RBP22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PLA2G4AP47712 749 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PEX5P50542 639 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 C1QBPQ07021 282 aaKnown RBP22.65■■□□□ 1.22
ATG4D-201ENST00000309469 C2CD6Q53TS8 623 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 MFSD14CQ5VZR4 134 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PAXIP1Q6ZW49 1069 aaPredicted RBP22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PHLDB2Q86SQ0 1253 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 KLHL7Q8IXQ5 586 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 C7orf31Q8N865 590 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 DPP3Q9NY33 737 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 ANAPC7Q9UJX3 599 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 ITGA11Q9UKX5 1188 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 GABRQQ9UN88 632 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 SPOPO43791 374 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 KPNA6O60684 536 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 FGGP02679 453 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 POLR2BP30876 1174 aaKnown RBP22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PTP4A2Q12974 167 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 SMC1BQ8NDV3 1235 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 PLEKHA5Q9HAU0 1116 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 AGAP1Q9UPQ3 857 aa22.65■■□□□ 1.22
ATG4D-201ENST00000309469 KAT6AQ92794 2004 aa22.64■■□□□ 1.22
ATG4D-201ENST00000309469 MYADML2A6NDP7 307 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 LSM8O95777 96 aaKnown RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 ALDH1A1P00352 501 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 C6orf222P0C671 652 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 MYBL2P10244 700 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CYBAP13498 195 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CTNNA2P26232 953 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 HOXC8P31273 242 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 RAP1GAPP47736 663 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 MARCKSL1P49006 195 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CDH8P55286 799 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 RBP5P82980 135 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 LACTBP83111 547 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 ZNF211Q13398 564 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CLUL1Q15846 466 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CYP4F22Q6NT55 531 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 MMS22LQ6ZRQ5 1243 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 TFAP2BQ92481 460 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 TRIB2Q92519 343 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 KIF12Q96FN5 646 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms