RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SDCCAG8Q86SQ7 713 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-201ENST00000309428 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
RETREG3-201ENST00000309428 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
RETREG3-201ENST00000309428 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
RETREG3-201ENST00000309428 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-201ENST00000309428 ADAM22Q9P0K1 906 aa13.4□□□□□ -0.26
RETREG3-201ENST00000309428 MYH11P35749 1972 aa13.4□□□□□ -0.26
RETREG3-201ENST00000309428 FAM187AA6NFU0 413 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 PHF2O75151 1096 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 PPFIA2O75334 1257 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 TRPA1O75762 1119 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 EPHB2P29323 1055 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 BZW1Q7L1Q6 419 aaKnown RBP13.4□□□□□ -0.27
RETREG3-201ENST00000309428 DNAJC9Q8WXX5 260 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 KREMEN1Q96MU8 473 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 SLCO1B3Q9NPD5 702 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 OLFML3Q9NRN5 406 aa13.4□□□□□ -0.27
RETREG3-201ENST00000309428 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 ZMYM2Q9UBW7 1377 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 ENTPD5O75356 428 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 PIP4K2CQ8TBX8 421 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 CYP4F11Q9HBI6 524 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 CHST7Q9NS84 486 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 CYP11B1P15538 503 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 CLUL1Q15846 466 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 I3L4J1 428 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 MAP3K7O43318 606 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 RAP1GAPP47736 663 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 ACTR2P61160 394 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 GPS1Q13098 491 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 TNFAIP1Q13829 316 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 NETO2Q8NC67 525 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 DDX50Q9BQ39 737 aaKnown RBP13.39□□□□□ -0.27
RETREG3-201ENST00000309428 TRABDQ9H4I3 376 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 MAD1L1Q9Y6D9 718 aa13.39□□□□□ -0.27
RETREG3-201ENST00000309428 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 ZNF862O60290 1169 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
RETREG3-201ENST00000309428 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.38□□□□□ -0.27
RETREG3-201ENST00000309428 LRRC23Q53EV4 343 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-201ENST00000309428 CEP128Q6ZU80 1094 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 CEP120Q8N960 986 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 ZFATQ9P243 1243 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 AGO2Q9UKV8 859 aaKnown RBP13.38□□□□□ -0.27
RETREG3-201ENST00000309428 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 KCNA3P22001 575 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 CCND2P30279 289 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-201ENST00000309428 RCN1Q15293 331 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 NBPF20Q3BBV1 942 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 GRAMD1BQ3KR37 738 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 CCT6BQ92526 530 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 SLC9A2Q9UBY0 812 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 FRMPD4Q14CM0 1322 aa13.38□□□□□ -0.27
RETREG3-201ENST00000309428 SLC16A3O15427 465 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SNX3O60493 162 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 RALAP11233 206 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 ETS1P14921 441 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 CIITAP33076 1130 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 RFC5P40937 340 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 BAG6P46379 1132 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 GSCP56915 257 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SLC8A3P57103 927 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 LY6KQ17RY6 165 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 HYIQ5T013 277 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 MIPOL1Q8TD10 442 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 GRK7Q8WTQ7 553 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SPOCK2Q92563 424 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 FGD4Q96M96 766 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 CALN1Q9BXU9 219 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 PAPOLBQ9NRJ5 636 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 MIF4GDA9UHW6 222 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 BANF1O75531 89 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms