RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 C15orf41Q9Y2V0 281 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 PCDHA10Q9Y5I2 948 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 CCDC188H7C350 402 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 NPM3O75607 178 aaKnown RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 NCF2P19878 526 aaPredicted RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 CARSP49589 748 aaKnown RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 CATSPER4Q7RTX7 472 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 EXOC8Q8IYI6 725 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 ERP27Q96DN0 273 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 NDEL1Q9GZM8 345 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 HACL1Q9UJ83 578 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 SIK3Q9Y2K2 1263 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 TTC4O95801 387 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 INHBAP08476 426 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 FOXD4Q12950 439 aaPredicted RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 TRMT10CQ7L0Y3 403 aaKnown RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 TTC30BQ8N4P2 665 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 ETNPPLQ8TBG4 499 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 CASP10Q92851 521 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 SPATA17Q96L03 361 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 FIS1Q9Y3D6 152 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 CYP3A7-CYP3A51PA0A087WV96 503 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 STK25O00506 426 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 SLC16A3O15427 465 aaKnown RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 CYP3A7P24462 503 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 SFNP31947 248 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 ABCD1P33897 745 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 CDK17Q00537 523 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 COG2Q14746 738 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 CDO1Q16878 200 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 SLC17A8Q8NDX2 589 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 NMD3Q96D46 503 aaKnown RBP9.78□□□□□ -0.84
XCR1-201ENST00000309285 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 HOXC10Q9NYD6 342 aa9.78□□□□□ -0.84
XCR1-201ENST00000309285 NQO1P15559 274 aaKnown RBP9.77□□□□□ -0.84
XCR1-201ENST00000309285 BASP1P80723 227 aaKnown RBP9.77□□□□□ -0.84
XCR1-201ENST00000309285 TKFCQ3LXA3 575 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 SGO2Q562F6 1265 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 OLFML1Q6UWY5 402 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 KLHL23Q8NBE8 558 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.84
XCR1-201ENST00000309285 PDP2Q9P2J9 529 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 CASZ1Q86V15 1759 aa9.77□□□□□ -0.84
XCR1-201ENST00000309285 PON1P27169 355 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 PGM1P36871 562 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 CASP2P42575 452 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 CCNHP51946 323 aaPredicted RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 BTN2A1Q7KYR7 527 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 DNAAF5Q86Y56 855 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 AGGF1Q8N302 714 aaeCLIP9.77□□□□□ -0.85
XCR1-201ENST00000309285 BBS5Q8N3I7 341 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ASCC2Q9H1I8 757 aaPredicted RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 GPRC5CQ9NQ84 441 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ZNF229Q9UJW7 825 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 HNRNPCL2B2RXH8 293 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 HNRNPCL1O60812 293 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ATP6V1B1P15313 513 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 CIITAP33076 1130 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 SOX5P35711 763 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ASPHQ12797 758 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 R3HDM1Q15032 1099 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 CYFIP1Q7L576 1253 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ANKZF1Q9H8Y5 726 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 NGRNQ9NPE2 291 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 UBN1Q9NPG3 1134 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 REXO2Q9Y3B8 237 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 MAGEA13PA6NCF6 341 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 RCCD1A6NED2 376 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 PFDN6O15212 129 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 EIF3DO15371 548 aaKnown RBP eCLIP9.77□□□□□ -0.85
XCR1-201ENST00000309285 MT-ND3P03897 115 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 ARSHQ5FYA8 562 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 DSTYKQ6XUX3 929 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 FUKQ8N0W3 1084 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 BBOF1Q8ND07 529 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 CDKL2Q92772 493 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 HEXIM2Q96MH2 286 aaKnown RBP9.77□□□□□ -0.85
XCR1-201ENST00000309285 WDR18Q9BV38 432 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 TEX13BQ9BXU2 312 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 KCND2Q9NZV8 630 aa9.77□□□□□ -0.85
XCR1-201ENST00000309285 VCAM1P19320 739 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 CCDC15Q0P6D6 951 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 ZCWPW2Q504Y3 356 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 DNAJC24Q6P3W2 148 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 KDM7AQ6ZMT4 941 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 ZNF720Q7Z2F6 126 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 MCPH1Q8NEM0 835 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 OR6B3Q8NGW1 331 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 GANCQ8TET4 914 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 FAM213AQ9BRX8 229 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 PACSIN1Q9BY11 444 aa9.76□□□□□ -0.85
XCR1-201ENST00000309285 ACAD9Q9H845 621 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms