RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ACCSQ96QU6 501 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 EIF2AQ9BY44 585 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 TMEM206Q9H813 350 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 RC3H2Q9HBD1 1191 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 KIAA1468Q9P260 1216 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 EXOC7Q9UPT5 735 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 RRP15Q9Y3B9 282 aaKnown RBP8.91□□□□□ -0.98
CHD6-201ENST00000309279 IPPQ9Y573 584 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 PCDHB7Q9Y5E2 793 aa8.91□□□□□ -0.98
CHD6-201ENST00000309279 GBF1Q92538 1859 aa8.9□□□□□ -0.98
CHD6-201ENST00000309279 UBE4BO95155 1302 aa8.9□□□□□ -0.98
CHD6-201ENST00000309279 TRIP11Q15643 1979 aa8.9□□□□□ -0.98
CHD6-201ENST00000309279 A0A0B4J269 797 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 FAM170AA1A519 330 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 FAM221BA6H8Z2 402 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 FAM25EA8MYX2 175 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 HNRNPDLO14979 420 aaKnown RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 CLDN3O15551 220 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 PRPF6O94906 941 aaKnown RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 ATF4P18848 351 aaPredicted RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 DCAF4L1Q3SXM0 396 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 FAM109BQ6ICB4 259 aaPredicted RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 MPZL3Q6UWV2 235 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 TMEM174Q8WUU8 243 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 ATXN2LQ8WWM7 1075 aaKnown RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 SMARCE1Q969G3 411 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 ZBTB45Q96K62 511 aaPredicted RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 ADPGKQ9BRR6 497 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.99
CHD6-201ENST00000309279 HAPLN2Q9GZV7 340 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 CLSTN2Q9H4D0 955 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 VTI1BQ9UEU0 232 aa8.9□□□□□ -0.99
CHD6-201ENST00000309279 COL4A6Q14031 1691 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 CITO14578 2027 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 ZMYM2Q9UBW7 1377 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 GOLGA6L3A6NEY3 463 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 GRXCR1A8MXD5 290 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 INPPL1O15357 1258 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 TGFB1I1O43294 461 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 FAM189A1O60320 539 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 NPTXRO95502 500 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 MCF2P10911 925 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 RAC2P15153 192 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 ADSSP30520 456 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 LIG4P49917 911 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 SNRPFP62306 86 aaKnown RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 SMAD3P84022 425 aaKnown RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 DMTNQ08495 405 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
CHD6-201ENST00000309279 CAMK4Q16566 473 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 KNOP1Q1ED39 458 aaKnown RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 ZNF658Q5TYW1 1059 aaPredicted RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 SLFN12LQ6IEE8 588 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 UNC5DQ6UXZ4 953 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 AGMOQ6ZNB7 445 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 TMCO2Q7Z6W1 182 aaPredicted RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 C1orf216Q8TAB5 229 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 GABPB2Q8TAK5 448 aaPredicted RBP8.89□□□□□ -0.99
CHD6-201ENST00000309279 BICD1Q96G01 975 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 RAD9AQ99638 391 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 TCHPQ9BT92 498 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 GBP3Q9H0R5 595 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 NUP62CLQ9H1M0 184 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 CDT1Q9H211 546 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 RNF39Q9H2S5 420 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 UBN1Q9NPG3 1134 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 LRFN2Q9ULH4 789 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 ITM2BQ9Y287 266 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 GDAQ9Y2T3 454 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 HES2Q9Y543 173 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 INSL6Q9Y581 213 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 SNX5Q9Y5X3 404 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 TRANK1O15050 2925 aa8.89□□□□□ -0.99
CHD6-201ENST00000309279 MEIS3P2A8K0S8 358 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 ANKRD63C9JTQ0 380 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 OFD1O75665 1012 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 UPP2O95045 317 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 BMP6P22004 513 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 GARTP22102 1010 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 VARSP26640 1264 aaKnown RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 FOXK1P85037 733 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 ROR1Q01973 937 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 BIRC3Q13489 604 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 KYAT1Q16773 422 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 ZNF568Q3ZCX4 644 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 CLLU1OSQ5K130 101 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 RBM43Q6ZSC3 357 aaKnown RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 MAATS1Q7Z4T9 603 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 HACE1Q8IYU2 909 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 SYCP3Q8IZU3 236 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 GUF1Q8N442 669 aaKnown RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 ARL10Q8N8L6 244 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 TRIML1Q8N9V2 468 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 GSTCDQ8NEC7 633 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 IPCEF1Q8WWN9 437 aaPredicted RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 PBX4Q9BYU1 374 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms