RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 CLIC4Q9Y696 253 aa8.72□□□□□ -1.01
PPARGC1B-201ENST00000309241 C5orf58C9J3I9 102 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 CBFA2T3O75081 653 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 KRT6CP48668 564 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 PTGDRQ13258 359 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 ZNF568Q3ZCX4 644 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 LRRN4CLQ8ND94 238 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 VMP1Q96GC9 406 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 TBX22Q9Y458 520 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 TRAPPC3O43617 180 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 AARSP49588 968 aaKnown RBP eCLIP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 CARSP49589 748 aaKnown RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 RESP18Q5W5W9 173 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 RRM2BQ7LG56 351 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 NOA1Q8NC60 698 aaKnown RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 LINC00301Q8NCQ3 95 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 STKLD1Q8NE28 680 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 CYLDQ9NQC7 956 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 LIMA1Q9UHB6 759 aaKnown RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 MYO3BQ8WXR4 1341 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 KATNA1O75449 491 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 CNTFP26441 200 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 COPB2P35606 906 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 TUBA1BP68363 451 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 TUBA1AQ71U36 451 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 PYROXD1Q8WU10 500 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 RMDN3Q96TC7 470 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 RPAP3Q9H6T3 665 aaPredicted RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 CIDEBQ9UHD4 219 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 DDX20Q9UHI6 824 aaKnown RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 PCDHA5Q9Y5H7 936 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 UNC13BO14795 1591 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 AKT1P31749 480 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 LRRC14Q15048 493 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.01
PPARGC1B-201ENST00000309241 PSMD14O00487 310 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 BTBD8Q5XKL5 378 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 TSPAN17Q96FV3 270 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 ABHD10Q9NUJ1 306 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 FBXO9Q9UK97 447 aaPredicted RBP8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 CDC42BPGQ6DT37 1551 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 CCDC189A1A4V9 331 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 HOXC10Q9NYD6 342 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 PRKAA2P54646 552 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 GPR141Q7Z602 305 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 RAPGEF5Q92565 580 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 SYMPKQ92797 1274 aaKnown RBP8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 SPATA33Q96N06 139 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 QKIQ96PU8 341 aaKnown RBP eCLIP8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 RHOBTB1O94844 696 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 RAP1GAPP47736 663 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 HK2P52789 917 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 STILQ15468 1287 aa8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 SMYD4Q8IYR2 804 aaPredicted RBP8.71□□□□□ -1.02
PPARGC1B-201ENST00000309241 G2E3Q7L622 706 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 ZCWPW1Q9H0M4 648 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 LRRC53A6NM62 1247 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 SLCO1B7G3V0H7 640 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 TBC1D4O60343 1298 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 TRIP13Q15645 432 aaPredicted RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 OTUD5Q96G74 571 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 RANBP17Q9H2T7 1088 aaKnown RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 APPL1Q9UKG1 709 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 NCK2O43639 380 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 S100A1P23297 94 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 GRK2P25098 689 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 CENPAP49450 140 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 MRPL1Q9BYD6 325 aaKnown RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 STAP1Q9ULZ2 295 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 CEP152O94986 1710 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 ATP9AO75110 1047 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 USP4Q13107 963 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 MASTLQ96GX5 879 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 STOML2Q9UJZ1 356 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 DFFAO00273 331 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 TCF3P15923 654 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 ITIH2P19823 946 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 MAPK6Q16659 721 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 SFR1Q86XK3 245 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 SAMSN1Q9NSI8 373 aaKnown RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 HSPA4LO95757 839 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 BFSP2Q13515 415 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 NDNQ99608 321 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 ARHGEF38Q9NXL2 777 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 PTPRKQ15262 1439 aa8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 KPNA4O00629 521 aaPredicted RBP8.7□□□□□ -1.02
PPARGC1B-201ENST00000309241 RPS6KA5O75582 802 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms