RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GINM1Q9NU53 330 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 SMPD4Q9NXE4 827 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 DNAJC12Q9UKB3 198 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 FNDC3AQ9Y2H6 1198 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 PCDHB2Q9Y5E7 798 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 RBM47A0AV96 593 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 BICDL2A1A5D9 508 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MYO1CO00159 1063 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 FOXN3O00409 490 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 NRDCO43847 1150 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MGEA5O60502 916 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 DKC1O60832 514 aaKnown RBP eCLIP5.28□□□□□ -1.56
CAST-201ENST00000309190 TADA2AO75478 443 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 URI1O94763 535 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 RHOBTB3O94955 611 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MOCS2O96007 188 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 CFHP08603 1231 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CETN1Q12798 172 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TMEM119Q4V9L6 283 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TTI2Q6NXR4 508 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MAMDC4Q6UXC1 1216 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TMC7Q7Z402 723 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 NECAB2Q7Z6G3 386 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ZC3H3Q8IXZ2 948 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 SLC20A1Q8WUM9 679 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 C7orf25Q9BPX7 421 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CELF4Q9BZC1 486 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 NACA2Q9H009 215 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ZDHHC4Q9NPG8 344 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MIOSQ9NXC5 875 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 GNEQ9Y223 722 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 A8MXQ7 604 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 ATP2A1O14983 1001 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 GPR37O15354 613 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 MAFGO15525 162 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SGPL1O95470 568 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 GNAT1P11488 350 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CPB1P15086 417 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 NCOA4Q13772 614 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 DRAP1Q14919 205 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 ZNF699Q32M78 642 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 PRSS55Q6UWB4 352 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 ARHGEF19Q8IW93 802 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 UBXN4Q92575 508 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SEMA4DQ92854 862 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CEP89Q96ST8 783 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SEPT5Q99719 369 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 C11orf70Q9BRQ4 267 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 PACSIN1Q9BY11 444 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 IFT122Q9HBG6 1241 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ABHD10Q9NUJ1 306 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 PCSK1NQ9UHG2 260 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CDC23Q9UJX2 597 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TMEM59LQ9UK28 342 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 HPCAL4Q9UM19 191 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 DIS3Q9Y2L1 958 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 MAFBQ9Y5Q3 323 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 PLA2G6O60733 806 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SRGAP2O75044 1071 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 HLA-DRAP01903 254 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CKBP12277 381 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ITGA4P13612 1032 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 LCP1P13796 627 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ACTN2P35609 894 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 DYNLT1P63172 113 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 FAM171A1Q5VUB5 890 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 KAZNQ674X7 775 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SLC39A4Q6P5W5 647 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 EMC1Q8N766 993 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ATAD1Q8NBU5 361 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 RUBCNQ92622 972 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ZMAT2Q96NC0 199 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 BAG1Q99933 345 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 TRIM31Q9BZY9 425 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 LRRC27Q9C0I9 530 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SMYD3Q9H7B4 428 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CALCOCO1Q9P1Z2 691 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 HMGXB4Q9UGU5 601 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 AJAP1Q9UKB5 411 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 COL2A1P02458 1487 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 ZBTB42B2RXF5 422 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 AGRPO00253 132 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 ENDOD1O94919 500 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 FTCDO95954 541 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TNNC2P02585 160 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 EIF4A3P38919 411 aaKnown RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 CLCNKBP51801 687 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 PPP2R5AQ15172 486 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 C9orf50Q5SZB4 431 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 LHX8Q68G74 356 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 FOXR2Q6PJQ5 311 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 CHRDL2Q6WN34 429 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SLC47A2Q86VL8 602 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 FAM228AQ86W67 206 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 TMEM173Q86WV6 379 aaPredicted RBP5.28□□□□□ -1.56
CAST-201ENST00000309190 CPNE8Q86YQ8 564 aa5.28□□□□□ -1.56
CAST-201ENST00000309190 SLAIN1Q8ND83 568 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms