RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CAPN1P07384 714 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EXOSC10Q01780 885 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 AGBL3Q8NEM8 1001 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 NEK6Q9HC98 313 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ST14Q9Y5Y6 855 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 CROCCQ5TZA2 2017 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 HACD1B0YJ81 288 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EYA4O95677 639 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 IFRD2Q12894 506 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 XKR9Q5GH70 373 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TTC39BQ5VTQ0 682 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 SLC30A8Q8IWU4 369 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 FMR1NBQ8N0W7 255 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 SIX6OS1Q8N1H7 587 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 LCORLQ8N3X6 602 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ZNF555Q8NEP9 628 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RNF139Q8WU17 664 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 CFAP36Q96G28 342 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ATAD3AQ9NVI7 634 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 LVRNQ6Q4G3 990 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ASZ1Q8WWH4 475 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RPRD1BQ9NQG5 326 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 PCDHA10Q9Y5I2 948 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 MSCO60682 206 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RENBPP51606 427 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 GNGT1P63211 74 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ARID5AQ03989 594 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 XKR3Q5GH77 459 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EFHC1Q5JVL4 640 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 DNAAF3Q8N9W5 541 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ARHGEF1Q92888 912 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 SPATA16Q9BXB7 569 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EMSYQ7Z589 1322 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 GNGT2O14610 69 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EIF4BP23588 611 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 OTUD4Q01804 1114 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 PDE1CQ14123 709 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 C16orf72Q14CZ0 275 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TTBK2Q6IQ55 1244 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RDH13Q8NBN7 331 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 EAF2Q96CJ1 260 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 NAF1Q96HR8 494 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 KLC4Q9NSK0 619 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 NID2Q14112 1375 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 UQCRBP14927 111 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 OCRLQ01968 901 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 CUL3Q13618 768 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SETD9Q8NE22 299 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 FAM172AQ8WUF8 416 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 AP3S1Q92572 193 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 MTERF3Q96E29 417 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ERP44Q9BS26 406 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TEX13BQ9BXU2 312 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 PDE9AO76083 593 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 PLA2G4BP0C869 781 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SDC4P31431 198 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SPRP35270 261 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 NAMPTP43490 491 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 DIXDC1Q155Q3 683 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 GRAMD4Q6IC98 578 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TTC27Q6P3X3 843 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RASSF5Q8WWW0 418 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ING2Q9H160 280 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 PPM1FP49593 454 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 PLOD1Q02809 727 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 SKIDA1Q1XH10 827 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 USP17L2Q6R6M4 530 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RAPH1Q70E73 1250 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 PHF20Q9BVI0 1012 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ASB7Q9H672 318 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 MBD2Q9UBB5 411 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 HMGXB4Q9UGU5 601 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SPACA6W5XKT8 324 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TBKBP1A7MCY6 615 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ITGB3BPQ13352 177 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 PPIL2Q13356 520 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PNOCQ13519 176 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SLC10A5Q5PT55 438 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CC2D1AQ6P1N0 951 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 POLNQ7Z5Q5 900 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 MREGQ8N565 214 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ACOT12Q8WYK0 555 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 LARP6Q9BRS8 491 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 EVA1BQ9NVM1 165 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SCHIP1Q9P0W5 487 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 KANSL3Q9P2N6 904 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PCDHGA3Q9Y5H0 932 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NUP188Q5SRE5 1749 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SYF2O95926 243 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 NR3C2P08235 984 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 POLR2FP61218 127 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 CHRNDQ07001 517 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 EFHC2Q5JST6 749 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 C15orf52Q6ZUT6 534 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 AVL9Q8NBF6 648 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PGBD4Q96DM1 585 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM193BQ96PV7 902 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 C1orf50Q9BV19 199 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ABHD2P08910 425 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms