RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 SPOUT1Q5T280 376 aaKnown RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 FAM102AQ5T9C2 384 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 MCOLN2Q8IZK6 566 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 C7orf31Q8N865 590 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 GDAP1Q8TB36 358 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 EPS8L1Q8TE68 723 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 FAM149B1Q96BN6 582 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SGSM3Q96HU1 749 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 MCEEQ96PE7 176 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 APOL6Q9BWW8 343 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 GLI3P10071 1580 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 CHN1P15882 459 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 PTPRAP18433 802 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 JAM2P57087 298 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SNAPC2Q13487 334 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 TSNAXIP1Q2TAA8 658 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 ASTE1Q2TB18 679 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 PHLDB3Q6NSJ2 640 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 ABRAQ8N0Z2 381 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 NME8Q8N427 588 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 RBM15Q96T37 977 aaKnown RBP eCLIP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 PDIA2Q13087 525 aaKnown RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 TMEM132DQ14C87 1099 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 HIF1AQ16665 826 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 P3H1Q32P28 736 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 GPAT2Q6NUI2 795 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 MPZL3Q6UWV2 235 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 TMC3Q7Z5M5 1100 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 ERO1BQ86YB8 467 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 AFAP1L2Q8N4X5 818 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SHC3Q92529 594 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 LENG9Q96B70 501 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 MROH8Q9H579 483 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 SCAF8Q9UPN6 1271 aaKnown RBP11.51□□□□□ -0.57
PCDHGC4-201ENST00000306593 RALAP11233 206 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ITGA8P53708 1063 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 SF3A3Q12874 501 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 PRPSAP1Q14558 356 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CCNG2Q16589 344 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 SHROOM1Q2M3G4 852 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 NOP9Q86U38 636 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 SIX6OS1Q8N1H7 587 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 NSMCE1Q8WV22 266 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ZNF560Q96MR9 790 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 POP1Q99575 1024 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CFAP73A6NFT4 308 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 HGSO14964 777 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CYP1A2P05177 515 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ITGA4P13612 1032 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 DRG2P55039 364 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 EPC2Q52LR7 807 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ZBED8Q8IZ13 594 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 KIAA1257Q9ULG3 409 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ZC3H3Q8IXZ2 948 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 GLIS2Q9BZE0 524 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 STK38LQ9Y2H1 464 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 RRM1P23921 792 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 PSMC4P43686 418 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 EFCAB12Q6NXP0 572 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 LMNTD2Q8IXW0 634 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 PORCNQ9H237 461 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 A1CFQ9NQ94 594 aaKnown RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 NEU2Q9Y3R4 380 aa11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 COL2A1P02458 1487 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC4-201ENST00000306593 ANKRD63C9JTQ0 380 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 KRT38O76015 456 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 KCNJ1P48048 391 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 BCAR1P56945 870 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 ITGB3BPQ13352 177 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 ATG16L1Q676U5 607 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 FBXO25Q8TCJ0 367 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 PPP1R16BQ96T49 567 aa11.49□□□□□ -0.57
PCDHGC4-201ENST00000306593 DDX23Q9BUQ8 820 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms