RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 CFAP54Q96N23 3096 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 MYO10Q9HD67 2058 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 C2orf16Q68DN1 1984 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 SERPINC1P01008 464 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 GALTP07902 379 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 NOMO2Q5JPE7 1267 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 ATAT1Q5SQI0 421 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 CD302Q8IX05 232 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 TMEM105Q8N8V8 129 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 TMC2Q8TDI7 906 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 SLC22A17Q8WUG5 538 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
UBXN1-202ENST00000301935 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 TUBGCP2Q9BSJ2 902 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 CDT1Q9H211 546 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 IKZF4Q9H2S9 585 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 INPP5FQ9Y2H2 1132 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 DMDP11532 3685 aa16.35■□□□□ 0.21
UBXN1-202ENST00000301935 TTLL13PA6NNM8 815 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 TISP43B9A030 160 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 ZNF623O75123 536 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 IL18RAPO95256 599 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 GRM5P41594 1212 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 FANCCQ00597 558 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 RNASELQ05823 741 aaKnown RBP16.34■□□□□ 0.21
UBXN1-202ENST00000301935 PTPN14Q15678 1187 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 MAN2A1Q16706 1144 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 EEF1DP3Q658K8 133 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 PPFIBP1Q86W92 1011 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 TRIM59Q8IWR1 403 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 SNX27Q96L92 541 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 FAM213AQ9BRX8 229 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
UBXN1-202ENST00000301935 VN1R3Q9BXE9 311 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 SFXN1Q9H9B4 322 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 PLEKHA5Q9HAU0 1116 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 DNAJB4Q9UDY4 337 aa16.34■□□□□ 0.21
UBXN1-202ENST00000301935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBXN1-202ENST00000301935 PROB1E7EW31 1015 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 B4GALT3O60512 393 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 OFD1O75665 1012 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 GTF2H1P32780 548 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 SLC11A1P49279 550 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 CASP4P49662 377 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 AP3M2P53677 418 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 UBASH3AP57075 661 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 CYP24A1Q07973 514 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 BFSP1Q12934 665 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 PSMD6Q15008 389 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 KRT31Q15323 416 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 TMC5Q6UXY8 1006 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 FEZF2Q8TBJ5 459 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 PGBD4Q96DM1 585 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 SAAL1Q96ER3 474 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 ACAP3Q96P50 834 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 RPF1Q9H9Y2 349 aaKnown RBP16.33■□□□□ 0.2
UBXN1-202ENST00000301935 UBN1Q9NPG3 1134 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-202ENST00000301935 LIMD1Q9UGP4 676 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 CPSF3Q9UKF6 684 aaKnown RBP16.33■□□□□ 0.2
UBXN1-202ENST00000301935 USP20Q9Y2K6 914 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-202ENST00000301935 CACNA1HO95180 2353 aa16.33■□□□□ 0.2
UBXN1-202ENST00000301935 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 FAM189A1O60320 539 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 NPTXRO95502 500 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 ATP1A3P13637 1013 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 ACOT2P49753 483 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 VAMP7P51809 220 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 COPB1P53618 953 aaKnown RBP16.32■□□□□ 0.2
UBXN1-202ENST00000301935 YARSP54577 528 aaKnown RBP16.32■□□□□ 0.2
UBXN1-202ENST00000301935 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-202ENST00000301935 CRELD2Q6UXH1 353 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-202ENST00000301935 CCDC149Q6ZUS6 474 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 GPR149Q86SP6 731 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 BRSK2Q8IWQ3 736 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 URGCPQ8TCY9 931 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 FNBP1Q96RU3 617 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 ASB7Q9H672 318 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-202ENST00000301935 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
UBXN1-202ENST00000301935 PMM2O15305 246 aa16.31■□□□□ 0.2
UBXN1-202ENST00000301935 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
UBXN1-202ENST00000301935 ADRB2P07550 413 aa16.31■□□□□ 0.2
UBXN1-202ENST00000301935 HARSP12081 509 aaKnown RBP16.31■□□□□ 0.2
UBXN1-202ENST00000301935 NBL1P41271 181 aa16.31■□□□□ 0.2
UBXN1-202ENST00000301935 CLCN4P51793 760 aa16.31■□□□□ 0.2
UBXN1-202ENST00000301935 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms