RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SNRNP48Q6IEG0 339 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 NOP53Q9NZM5 478 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 SYNPO2Q9UMS6 1093 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 DNAJC8O75937 253 aaPredicted RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 RTN3O95197 1032 aaPredicted RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 IFNB1P01574 187 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 NLRP11P59045 1033 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ANKRD20A2Q5SQ80 823 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ANKRD20A1Q5TYW2 823 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ANKRD20A3Q5VUR7 823 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 FAM47EQ6ZV65 393 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 LRRC37AA6NMS7 1700 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 POC1B-GALNT4F8VUJ3 575 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 PLSCR1O15162 318 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 PAEPP09466 180 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 GBP1P32455 592 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 WNT7BP56706 349 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 STRN3Q13033 797 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 CNGA2Q16280 664 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 LONP2Q86WA8 852 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 SNF8Q96H20 258 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ATAD5Q96QE3 1844 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 ZNF148Q9UQR1 794 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 KRT16P08779 473 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 STX2P32856 288 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PRKCEQ02156 737 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 ZBTB41Q5SVQ8 909 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 DRAXINQ8NBI3 349 aaPredicted RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PSPC1Q8WXF1 523 aaKnown RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 ATP6V0A1Q93050 837 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 CNOT7Q9UIV1 285 aaKnown RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 H0Y3Z8 333 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 GRIN3BO60391 1043 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 UBOX5O94941 541 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 ZSCAN5DPP0CG00 497 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 SFNP31947 248 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 TAS2R40P59535 323 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 EN1Q05925 392 aaPredicted RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 BLMHQ13867 455 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 TMED2Q15363 201 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PHC3Q8NDX5 983 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 TARS2Q9BW92 718 aaKnown RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 BATF3Q9NR55 127 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 ANKEF1Q9NU02 776 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 CORO1CQ9ULV4 474 aaPredicted RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 MROH7Q68CQ1 1323 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 C5orf60A6NFR6 353 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 FSCN2O14926 492 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PEX10O60683 326 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 SPAG7O75391 227 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 GNA15P30679 374 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 SESN3P58005 492 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 ZBTB33Q86T24 672 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 GMLQ99445 158 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 AGO2Q9UKV8 859 aaKnown RBP14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 C2CD2Q9Y426 696 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 PCDHB2Q9Y5E7 798 aa14.25□□□□□ -0.13
CTDP1-202ENST00000299543 SRRM3A6NNA2 597 aaPredicted RBP14.24□□□□□ -0.13
CTDP1-202ENST00000299543 GOLGA8SH3BPF8 625 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 GOLGA8MH3BSY2 632 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 PIAS1O75925 651 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 HMGCS2P54868 508 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 TMEM62Q0P6H9 643 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 LACTB2Q53H82 288 aaPredicted RBP14.24□□□□□ -0.13
CTDP1-202ENST00000299543 IZUMO3Q5VZ72 239 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 SCARA3Q6AZY7 606 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 TRPM8Q7Z2W7 1104 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 CYP4X1Q8N118 509 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 ATL2Q8NHH9 583 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 DEPTORQ8TB45 409 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 OSBPL8Q9BZF1 889 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 DCLK3Q9C098 648 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 MYOZ2Q9NPC6 264 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 NKX1-2Q9UD57 310 aaPredicted RBP14.24□□□□□ -0.13
CTDP1-202ENST00000299543 K7ERI5 159 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 PLA2G6O60733 806 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 DPEP1P16444 411 aa14.24□□□□□ -0.13
CTDP1-202ENST00000299543 ITIH2P19823 946 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms