RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 FAXDC2Q96IV6 333 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 BCO2Q9BYV7 579 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 RNF39Q9H2S5 420 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
PTX3-201ENST00000295927 PARP2Q9UGN5 583 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 NOD1Q9Y239 953 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 DYNC1I1O14576 645 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 NCK2O43639 380 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 SRGAP2O75044 1071 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 RAP1GAPP47736 663 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 YWHAEP62258 255 aaKnown RBP24.42■■□□□ 1.5
PTX3-201ENST00000295927 GLRA4Q5JXX5 417 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 ACAD10Q6JQN1 1059 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 SH3TC2Q8TF17 1288 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 OSGEPQ9NPF4 335 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 KLK14Q9P0G3 267 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 SNX12Q9UMY4 172 aa24.42■■□□□ 1.5
PTX3-201ENST00000295927 THAP12O43422 761 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 FTCDO95954 541 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 GPC5P78333 572 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 NAA30Q147X3 362 aaPredicted RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 WHAMMP3Q1A5X7 153 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 SMYD5Q6GMV2 418 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 LRRC57Q8N9N7 239 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 TLR10Q9BXR5 811 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 RNF19AQ9NV58 838 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 TUBGCP4Q9UGJ1 667 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 STAU1O95793 577 aaKnown RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 UNGP13051 313 aaPredicted RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 ZNF394Q53GI3 561 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 BEST2Q8NFU1 509 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 C18orf25Q96B23 403 aaPredicted RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 OSBPL7Q9BZF2 842 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 SDCBP2Q9H190 292 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 PDCL3Q9H2J4 239 aa24.41■■□□□ 1.5
PTX3-201ENST00000295927 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.41■■□□□ 1.5
PTX3-201ENST00000295927 PUF60Q9UHX1 559 aaKnown RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 V9GYY5 206 aaPredicted RBP24.41■■□□□ 1.5
PTX3-201ENST00000295927 SCN1AP35498 2009 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 A0A1W2PQ45 241 aaPredicted RBP24.4■■□□□ 1.5
PTX3-201ENST00000295927 A0A1W2PQY0 241 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 CFHP08603 1231 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 CDH8P55286 799 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 TRIM71Q2Q1W2 868 aaKnown RBP24.4■■□□□ 1.5
PTX3-201ENST00000295927 XKR4Q5GH76 650 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 ZNF606Q8WXB4 792 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.4■■□□□ 1.5
PTX3-201ENST00000295927 SMYD3Q9H7B4 428 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 AGO3Q9H9G7 860 aaKnown RBP24.4■■□□□ 1.5
PTX3-201ENST00000295927 CHST12Q9NRB3 414 aa24.4■■□□□ 1.5
PTX3-201ENST00000295927 SMIM28A0A1B0GU29 152 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 GPR182O15218 404 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 CYP1A1P04798 512 aaPredicted RBP24.39■■□□□ 1.5
PTX3-201ENST00000295927 P4HA1P13674 534 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 PRLRP16471 622 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 FBXO47Q5MNV8 452 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 MEI1Q5TIA1 1274 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 RHOT2Q8IXI1 618 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 CEP112Q8N8E3 955 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 ARRDC4Q8NCT1 418 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 CYFIP2Q96F07 1278 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 GOLPH3Q9H4A6 298 aa24.39■■□□□ 1.5
PTX3-201ENST00000295927 UBQLN1Q9UMX0 589 aaKnown RBP24.39■■□□□ 1.5
PTX3-201ENST00000295927 TADA3O75528 432 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 KCNE1P15382 129 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 SSTR3P32745 418 aaPredicted RBP24.39■■□□□ 1.49
PTX3-201ENST00000295927 TCEAL1Q15170 157 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 TRIM72Q6ZMU5 477 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 CYP3A43Q9HB55 503 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 COG5Q9UP83 839 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 HYOU1Q9Y4L1 999 aa24.39■■□□□ 1.49
PTX3-201ENST00000295927 ZNF185O15231 689 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 NAA35Q5VZE5 725 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 SLFN11Q7Z7L1 901 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 CPA5Q8WXQ8 436 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 TSPAN18Q96SJ8 248 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 OSBPL9Q96SU4 736 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 BEGAINQ9BUH8 593 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 ERVK-5Q9HDB9 667 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 STARD7Q9NQZ5 370 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 PADI3Q9ULW8 664 aa24.38■■□□□ 1.49
PTX3-201ENST00000295927 PPEF2O14830 753 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 GHRP10912 638 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 CD52P31358 61 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 MYO1EQ12965 1108 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 FAM26DQ5JW98 314 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 PASD1Q8IV76 773 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 SLC43A3Q8NBI5 491 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 ZNF653Q96CK0 615 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 TRPV6Q9H1D0 765 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 FAM105AQ9NUU6 356 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 CTTNBP2NLQ9P2B4 639 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 EFCAB8A8MWE9 144 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 ATMINO43313 823 aaPredicted RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 TCP1P17987 556 aaKnown RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 BRD2P25440 801 aaKnown RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 HADHBP55084 474 aaKnown RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 TNNC1P63316 161 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 NOMO3P69849 1222 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 CENPCQ03188 943 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms