RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TAS1R2Q8TE23 839 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 POF1BQ8WVV4 589 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 VRTNQ9H8Y1 702 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 SZT2Q5T011 3432 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 NLRC5Q86WI3 1866 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 KPNA7A9QM74 516 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 HLA-DRAP01903 254 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 CDK11BP21127 795 aaKnown RBP24.31■■□□□ 1.48
LINC01116-201ENST00000295549 MYL6P60660 151 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 SGSM1Q2NKQ1 1148 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 VPS52Q8N1B4 723 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 ANKRD20A12PQ8NF67 263 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 TAF4BQ92750 862 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 LMAN2LQ9H0V9 348 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 CHST7Q9NS84 486 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 GDAP2Q9NXN4 497 aa24.31■■□□□ 1.48
LINC01116-201ENST00000295549 LIMA1Q9UHB6 759 aaKnown RBP24.31■■□□□ 1.48
LINC01116-201ENST00000295549 SYN3O14994 580 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 LPXNO60711 386 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 PRKCSHP14314 528 aaPredicted RBP24.3■■□□□ 1.48
LINC01116-201ENST00000295549 DNAJB1P25685 340 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 PIK3CAP42336 1068 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 FXR1P51114 621 aaKnown RBP eCLIP24.3■■□□□ 1.48
LINC01116-201ENST00000295549 CETN1Q12798 172 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 CAMK1Q14012 370 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 GRIN2CQ14957 1233 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 KRT31Q15323 416 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 USP41Q3LFD5 358 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 VWA3BQ502W6 1294 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 MIIPQ5JXC2 388 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 FAM171A1Q5VUB5 890 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 TAS1R1Q7RTX1 841 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 GDPD5Q8WTR4 605 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 HERC2P3Q9BVR0 1158 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 NDST4Q9H3R1 872 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 RAB20Q9NX57 234 aa24.3■■□□□ 1.48
LINC01116-201ENST00000295549 I3L4J1 428 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 ASS1P00966 412 aaKnown RBP24.29■■□□□ 1.48
LINC01116-201ENST00000295549 FGFR3P22607 806 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 TPM4P67936 248 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 MYL7Q01449 175 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.29■■□□□ 1.48
LINC01116-201ENST00000295549 GPR65Q8IYL9 337 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 SENP8Q96LD8 212 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 TTPALQ9BTX7 342 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 ZBP1Q9H171 429 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 TLR9Q9NR96 1032 aa24.29■■□□□ 1.48
LINC01116-201ENST00000295549 ARHGEF37A1IGU5 675 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 GOLGA6L19H0YKK7 550 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 CTSAP10619 480 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 ATP1A3P13637 1013 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 ZNF699Q32M78 642 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 PDE12Q6L8Q7 609 aaKnown RBP24.28■■□□□ 1.48
LINC01116-201ENST00000295549 DSTYKQ6XUX3 929 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 SEMA4DQ92854 862 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 IMPG2Q9BZV3 1241 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 PRDM12Q9H4Q4 367 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 NGRNQ9NPE2 291 aaKnown RBP24.28■■□□□ 1.48
LINC01116-201ENST00000295549 PCDHB8Q9UN66 801 aa24.28■■□□□ 1.48
LINC01116-201ENST00000295549 GTPBP10A4D1E9 387 aaKnown RBP24.27■■□□□ 1.48
LINC01116-201ENST00000295549 RFXAPO00287 272 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 CYB561D2O14569 222 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TPM2P07951 284 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TYMPP19971 482 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 ERVFC1P60507 584 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 DSG1Q02413 1049 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 BMS1Q14692 1282 aaKnown RBP24.27■■□□□ 1.48
LINC01116-201ENST00000295549 WDR72Q3MJ13 1102 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 CCDC150Q8NCX0 1101 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 APPL2Q8NEU8 664 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 SNX9Q9Y5X1 595 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 IRAK3Q9Y616 596 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 FSCN2O14926 492 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 ODC1P11926 461 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TKTP29401 623 aaKnown RBP24.27■■□□□ 1.48
LINC01116-201ENST00000295549 PTPROQ16827 1216 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 KIAA0319Q5VV43 1072 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 KIAA1841Q6NSI8 718 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 DPH6Q7L8W6 267 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 APTXQ7Z2E3 356 aaKnown RBP24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TMC7Q7Z402 723 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 LIMS2Q7Z4I7 341 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 MRPL38Q96DV4 380 aaKnown RBP24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TCF25Q9BQ70 676 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 TAB2Q9NYJ8 693 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 LMCD1Q9NZU5 365 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 DSEQ9UL01 958 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 SSX2IPQ9Y2D8 614 aa24.27■■□□□ 1.48
LINC01116-201ENST00000295549 SCN1AP35498 2009 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 TRANK1O15050 2925 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 HUS1O60921 280 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 CYP11A1P05108 521 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 GLUD2P49448 558 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 COPB1P53618 953 aaKnown RBP24.26■■□□□ 1.47
LINC01116-201ENST00000295549 NOP14P78316 857 aaKnown RBP24.26■■□□□ 1.47
LINC01116-201ENST00000295549 ZNF667Q5HYK9 610 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 WDR44Q5JSH3 913 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 RTP2Q5QGT7 225 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 PDXDC1Q6P996 788 aa24.26■■□□□ 1.47
LINC01116-201ENST00000295549 CEP57Q86XR8 500 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms