RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 BCL7CQ8WUZ0 217 aaPredicted RBP16.58■□□□□ 0.24
NCK1-201ENST00000288986 TTYH3Q9C0H2 523 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 METTL14Q9HCE5 456 aaKnown RBP16.58■□□□□ 0.24
NCK1-201ENST00000288986 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
NCK1-201ENST00000288986 NUB1Q9Y5A7 615 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
NCK1-201ENST00000288986 GRM6O15303 877 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 TNNC2P02585 160 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 KRT19P08727 400 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 SKILP12757 684 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 FECHP22830 423 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
NCK1-201ENST00000288986 LRPAP1P30533 357 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 BFSP1Q12934 665 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 FKBP15Q5T1M5 1219 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 POF1BQ8WVV4 589 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 PANX2Q96RD6 677 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 CGRRF1Q99675 332 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 AKR1B15C9JRZ8 316 aaPredicted RBP16.57■□□□□ 0.24
NCK1-201ENST00000288986 MFAP3LO75121 409 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 ITGB3P05106 788 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 MCCD1P59942 119 aaPredicted RBP16.57■□□□□ 0.24
NCK1-201ENST00000288986 C9orf57Q5W0N0 161 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 C1orf127Q8N9H9 656 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 MICAL1Q8TDZ2 1067 aa16.57■□□□□ 0.24
NCK1-201ENST00000288986 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
NCK1-201ENST00000288986 NLRC5Q86WI3 1866 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 CASP14P31944 242 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 ADKP55263 362 aaKnown RBP16.56■□□□□ 0.24
NCK1-201ENST00000288986 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 SYCP1Q15431 976 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 TRAPPC11Q7Z392 1133 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 DDX53Q86TM3 631 aaKnown RBP16.56■□□□□ 0.24
NCK1-201ENST00000288986 CNGA4Q8IV77 575 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 VPS52Q8N1B4 723 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 ZNF516Q92618 1163 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 IQCDQ96DY2 449 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 MMRN2Q9H8L6 949 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 KCND1Q9NSA2 647 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
NCK1-201ENST00000288986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.56■□□□□ 0.24
NCK1-201ENST00000288986 PPEF2O14830 753 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 LPXNO60711 386 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 SF3B1O75533 1304 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■■■■■ 77.5
NCK1-201ENST00000288986 TRIM49P0CI25 452 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 TRIM49CP0CI26 452 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 IGFBP4P22692 258 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 DNAJB1P25685 340 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 POLR2BP30876 1174 aaKnown RBP16.55■□□□□ 0.24
NCK1-201ENST00000288986 CLDN10P78369 228 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 UBE3AQ05086 875 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 BIRC3Q13489 604 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 RALGAPA2Q2PPJ7 1873 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 DCAF17Q5H9S7 520 aaPredicted RBP16.55■□□□□ 0.24
NCK1-201ENST00000288986 FUT10Q6P4F1 479 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 TMC7Q7Z402 723 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 GAS2L1Q99501 681 aaPredicted RBP16.55■□□□□ 0.24
NCK1-201ENST00000288986 KIAA1671Q9BY89 1806 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 GPR62Q9BZJ7 368 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 ITGA11Q9UKX5 1188 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 LZTS1Q9Y250 596 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 ANK1P16157 1881 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 ANO9A1A5B4 782 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 RNF225M0QZC1 329 aaPredicted RBP16.55■□□□□ 0.24
NCK1-201ENST00000288986 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
NCK1-201ENST00000288986 PIRO00625 290 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 STX10O60499 249 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 PHACTR2O75167 634 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 CA8P35219 290 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 CLCN1P35523 988 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 BRCC3P46736 316 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 AP3M2P53677 418 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 TLR9Q9NR96 1032 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 STK39Q9UEW8 545 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 CAPN11Q9UMQ6 739 aa16.55■□□□□ 0.24
NCK1-201ENST00000288986 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 I3L4J1 428 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 GCLMP48507 274 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 LILRA4P59901 499 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 ERVFC1P60507 584 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 RBP5P82980 135 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 PTPROQ16827 1216 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 FAM171A1Q5VUB5 890 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 SCARA3Q6AZY7 606 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 KIAA1841Q6NSI8 718 aa16.54■□□□□ 0.24
NCK1-201ENST00000288986 CD300LGQ6UXG3 332 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms