RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLFN12LQ6IEE8 588 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 ADPGKQ9BRR6 497 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 GLIS2Q9BZE0 524 aaPredicted RBP13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 RNF103-CHMP3A0A140T963 221 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 NOL4O94818 638 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 SKOR1P84550 965 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 PRKCEQ02156 737 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 MAPK6Q16659 721 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 GABPB2Q8TAK5 448 aaPredicted RBP13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 OSBPL8Q9BZF1 889 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 SPATA31C1P0DKV0 1188 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 PYGMP11217 842 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 CYP11B1P15538 503 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 ORC1Q13415 861 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 TBX20Q9UMR3 447 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 ASTN1O14525 1302 aa13.23□□□□□ -0.29
SLC6A1-201ENST00000287766 COPEO14579 308 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 KDM1AO60341 852 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 CPP00450 1065 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 GDF3Q9NR23 364 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 INPP5FQ9Y2H2 1132 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 UBE4BO95155 1302 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 AGTP01019 485 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 ZCCHC18P0CG32 403 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 ANXA13P27216 316 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 HNRNPH3P31942 346 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 HSPA9P38646 679 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 NPTX2P47972 431 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 MOXD1Q6UVY6 613 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 FAM81BQ96LP2 452 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 WDR18Q9BV38 432 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 GRAP2O75791 330 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 MAP3K6O95382 1288 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 GJB6O95452 261 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 FLT3P36888 993 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 BAG6P46379 1132 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 NBPF20Q3BBV1 942 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 ATG16L1Q676U5 607 aa13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 RBM41Q96IZ5 413 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 FAM49AQ9H0Q0 323 aaPredicted RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 DDX28Q9NUL7 540 aaKnown RBP13.22□□□□□ -0.29
SLC6A1-201ENST00000287766 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 TMC3Q7Z5M5 1100 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 UPF3AQ9H1J1 476 aaKnown RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 RXRBP28702 533 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 NOP14P78316 857 aaKnown RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 DAB2P98082 770 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 DGKZQ13574 1117 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 NCOA4Q13772 614 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 LRRC71Q8N4P6 559 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 PPM1NQ8N819 430 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 A6NJR5 290 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 CAPN9O14815 690 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 SNUPNO95149 360 aaKnown RBP13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 CDC25CP30307 473 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 STX1BP61266 288 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 CCDC90BQ9GZT6 254 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 TMX2Q9Y320 296 aa13.21□□□□□ -0.29
SLC6A1-201ENST00000287766 DGAT1O75907 488 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 ZBED1O96006 694 aa13.21□□□□□ -0.3
SLC6A1-201ENST00000287766 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms