RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 EFCAB13Q8IY85 973 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 SAAL1Q96ER3 474 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 TSPAN18Q96SJ8 248 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 C7orf25Q9BPX7 421 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 CBWD1Q9BRT8 395 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 RPP25Q9BUL9 199 aaKnown RBP15.65■□□□□ 0.1
HMGN3-201ENST00000275036 ASB7Q9H672 318 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 IGSF9Q9P2J2 1179 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 PCDHB8Q9UN66 801 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 EXOC7Q9UPT5 735 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 TIMM13Q9Y5L4 95 aaPredicted RBP15.65■□□□□ 0.1
HMGN3-201ENST00000275036 ANO9A1A5B4 782 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 XPOTO43592 962 aaKnown RBP15.64■□□□□ 0.09
HMGN3-201ENST00000275036 POU2F2P09086 479 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 ARPP19P56211 112 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 ASIC1P78348 528 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 EHHADHQ08426 723 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 ALCAMQ13740 583 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 POSTNQ15063 836 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 SLC5A9Q2M3M2 681 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 CTXN3Q4LDR2 81 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 GRAMD1CQ8IYS0 662 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 SYCP3Q8IZU3 236 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 SLC44A3Q8N4M1 653 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 BEST2Q8NFU1 509 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 LEO1Q8WVC0 666 aaPredicted RBP15.64■□□□□ 0.09
HMGN3-201ENST00000275036 FGF14Q92915 247 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 LRRC27Q9C0I9 530 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 BLZF1Q9H2G9 400 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGN3-201ENST00000275036 POLIQ9UNA4 740 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 DERAQ9Y315 318 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 C2CD2Q9Y426 696 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 NUMBLQ9Y6R0 609 aa15.64■□□□□ 0.09
HMGN3-201ENST00000275036 ARHGEF37A1IGU5 675 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 GOLGA8IPA6NC78 632 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 GOLGA8JA6NMD2 632 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 H7C4K7 107 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 PIRO00625 290 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 VNN2O95498 520 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 CFHP08603 1231 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 GARTP22102 1010 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 LILRA4P59901 499 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 AMPD3Q01432 767 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 POU5F1Q01860 360 aaKnown RBP15.63■□□□□ 0.09
HMGN3-201ENST00000275036 CUL4BQ13620 913 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 SCARA3Q6AZY7 606 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 PARM1Q6UWI2 310 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 EPM2AIP1Q7L775 607 aaPredicted RBP15.63■□□□□ 0.09
HMGN3-201ENST00000275036 APPL2Q8NEU8 664 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 FGF13Q92913 245 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 PCIF1Q9H4Z3 704 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 MAGEF1Q9HAY2 307 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 SERTAD1Q9UHV2 236 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 CDH7Q9ULB5 785 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
HMGN3-201ENST00000275036 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.63■□□□□ 0.09
HMGN3-201ENST00000275036 PIEZO1Q92508 2521 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.62■□□□□ 0.09
HMGN3-201ENST00000275036 KRBA1A5PL33 1030 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 PI15O43692 258 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 ACTN4O43707 911 aaKnown RBP15.62■□□□□ 0.09
HMGN3-201ENST00000275036 XYLBO75191 536 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 OAZ2O95190 189 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 OR4Q2P0C623 313 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 ATF2P15336 505 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 AFMP43652 599 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 PABPC1LQ4VXU2 614 aaKnown RBP15.62■□□□□ 0.09
HMGN3-201ENST00000275036 FAM26FQ5R3K3 315 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 DSTYKQ6XUX3 929 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 UNC13DQ70J99 1090 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 ALYREFQ86V81 257 aaKnown RBP15.62■□□□□ 0.09
HMGN3-201ENST00000275036 BRSK2Q8IWQ3 736 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 NPAS3Q8IXF0 933 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 ING5Q8WYH8 240 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 CRISPLD1Q9H336 500 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 TMEM206Q9H813 350 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 DPP3Q9NY33 737 aa15.62■□□□□ 0.09
HMGN3-201ENST00000275036 USP34Q70CQ2 3546 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 CACNA1HO95180 2353 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 A0A1B0GVL5 298 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 EXTL3O43909 919 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 IL18RAPO95256 599 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 PFKFB1P16118 471 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 KRT85P78386 507 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
HMGN3-201ENST00000275036 ASTLQ6HA08 431 aaPredicted RBP15.61■□□□□ 0.09
HMGN3-201ENST00000275036 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 RNF19BQ6ZMZ0 732 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 TCEAL8Q8IYN2 117 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 SIX5Q8N196 739 aa15.61■□□□□ 0.09
HMGN3-201ENST00000275036 FLCNQ8NFG4 579 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms