RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RFX5P48382 616 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CASP7P55210 303 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PARP10Q53GL7 1025 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TMEM63BQ5T3F8 832 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TMCO4Q5TGY1 634 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 OGFOD2Q6N063 350 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NANOGP8Q6NSW7 305 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 OTOAQ7RTW8 1153 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TMC7Q7Z402 723 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 C7orf43Q8WVR3 580 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 SHISA4Q96DD7 197 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CLPTM1LQ96KA5 538 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NEUROD6Q96NK8 337 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CCSER1Q9C0I3 900 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PAIP1Q9H074 479 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 SNX25Q9H3E2 840 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CDC42EP4Q9H3Q1 356 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 LY9Q9HBG7 655 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NPHS2Q9NP85 383 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 KLHL3Q9UH77 587 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 DCTN4Q9UJW0 460 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TNS2Q63HR2 1409 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF536O15090 1300 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 FAM47DPA6NHR8 397 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 S100BP04271 92 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 RBP3P10745 1247 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 THRAP10827 490 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CTAG1AP78358 180 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 KCNC4Q03721 635 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 DHX34Q14147 1143 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CRY1Q16526 586 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TRMT5Q32P41 509 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TMTC4Q5T4D3 741 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 LMBR1LQ6UX01 489 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 RGS9BPQ6ZS82 235 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ADGRG6Q86SQ4 1221 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 DHDDSQ86SQ9 333 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NT5DC3Q86UY8 548 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CACTIN-AS1Q8N1I8 211 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 EDEM3Q9BZQ6 932 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PLK2Q9NYY3 685 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 HEY2Q9UBP5 337 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ADAMTS6Q9UKP5 1117 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF330Q9Y3S2 320 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PCDHA3Q9Y5H8 950 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PAPPAQ13219 1627 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 DDX60Q8IY21 1712 aaKnown RBP9.71□□□□□ -0.85
PDGFC-201ENST00000274071 MYOCOSA0A1B0GUC4 107 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.85
PDGFC-201ENST00000274071 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.85
PDGFC-201ENST00000274071 CETPP11597 493 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 PEX2P28328 305 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 ACADSBP45954 432 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 AP3M2P53677 418 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 SLC5A3P53794 718 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 ATP2C1P98194 919 aaPredicted RBP9.71□□□□□ -0.85
PDGFC-201ENST00000274071 STK4Q13043 487 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 ATP1A4Q13733 1029 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 PRKG1Q13976 671 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 KRT81Q14533 505 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 PSMD6Q15008 389 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 FAM83BQ5T0W9 1011 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 SGMS1Q86VZ5 419 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 MARVELD2Q8N4S9 558 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 SLC25A41Q8N5S1 370 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 SYN2Q92777 582 aaPredicted RBP9.71□□□□□ -0.85
PDGFC-201ENST00000274071 C18orf8Q96DM3 657 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 RIC8AQ9NPQ8 531 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 NAALADL1Q9UQQ1 740 aa9.71□□□□□ -0.85
PDGFC-201ENST00000274071 TOGARAM1Q9Y4F4 1720 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 ADGRA3Q8IWK6 1321 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 B4E1Z4 1266 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 GUCY1B2O75343 617 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
PDGFC-201ENST00000274071 SPAG7O75391 227 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 BBOX1O75936 387 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 BAIAP3O94812 1187 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 NOL4O94818 638 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 DEXIO95424 95 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 BMP15O95972 392 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 CHEK2O96017 543 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 BDNFP23560 247 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 CETN2P41208 172 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PTGIRP43119 386 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 TCIRG1Q13488 830 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 TXNRD1Q16881 649 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 NAALADL2Q58DX5 795 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PCNX4Q63HM2 1172 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 TRMT10CQ7L0Y3 403 aaKnown RBP9.71□□□□□ -0.86
PDGFC-201ENST00000274071 CATIPQ7Z7H3 387 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms