RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 HIBCHQ6NVY1 386 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 TRPM8Q7Z2W7 1104 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 UBR7Q8N806 425 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ATG4CQ96DT6 458 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 CTNNAL1Q9UBT7 734 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 PRKAG3Q9UGI9 489 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ANAPC5Q9UJX4 755 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 TCRBV5S1A1TA0A578 114 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 H0YCG3 227 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 GAS8O95995 478 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 PSAPP07602 524 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 VIMP08670 466 aaKnown RBP13.22□□□□□ -0.29
BEST3-201ENST00000266661 ATF2P15336 505 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 ATP4AP20648 1035 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 ABCD1P33897 745 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 IFNAR2P48551 515 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
BEST3-201ENST00000266661 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 C2CD6Q53TS8 623 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 SPOPLQ6IQ16 392 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 PHLDB2Q86SQ0 1253 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 RHOT1Q8IXI2 618 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
BEST3-201ENST00000266661 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
BEST3-201ENST00000266661 ACTL7BQ9Y614 415 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 SIP14410 1827 aa13.22□□□□□ -0.29
BEST3-201ENST00000266661 FOXO6A8MYZ6 492 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 SPATA31C2B4DYI2 1134 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 ABHD2P08910 425 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 ZNF132P52740 706 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 PRKCEQ02156 737 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 MTMR2Q13614 643 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 CUL2Q13617 745 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 TRIP13Q15645 432 aaPredicted RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 MAML1Q92585 1016 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 ABCF3Q9NUQ8 709 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 USP15Q9Y4E8 981 aaPredicted RBP13.21□□□□□ -0.29
BEST3-201ENST00000266661 ADGRA2Q96PE1 1338 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
BEST3-201ENST00000266661 ATG7O95352 703 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 GJB6O95452 261 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 ATP5DP30049 168 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 ADCY8P40145 1251 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 ACTR2P61160 394 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 FSTL1Q12841 308 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 RIPK1Q13546 671 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 TNFAIP1Q13829 316 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 LRRC14Q15048 493 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 SNCBQ16143 134 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 XKR3Q5GH77 459 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 WDR44Q5JSH3 913 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 CGB2Q6NT52 195 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.3
BEST3-201ENST00000266661 BBOF1Q8ND07 529 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 HEMGNQ9BXL5 484 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 SLC9A2Q9UBY0 812 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 TCEAL9Q9UHQ7 104 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.3
BEST3-201ENST00000266661 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.3
BEST3-201ENST00000266661 TCP11X1B4DZS4 312 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 ATP2C2O75185 946 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 EDN1P05305 212 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 CLTAP09496 248 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 GCAP28676 217 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 ARL2P36404 184 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 OAZ1P54368 228 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 STAT4Q14765 748 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 MRPL47Q9HD33 250 aaKnown RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
BEST3-201ENST00000266661 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
BEST3-201ENST00000266661 KCNG1Q9UIX4 513 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms