RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PTK6Q13882 451 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
SQLE-201ENST00000265896 PHTF1Q9UMS5 762 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
SQLE-201ENST00000265896 NUMBLQ9Y6R0 609 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 ZNF541Q9H0D2 1346 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 ICAM1P05362 532 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 EPHB2P29323 1055 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 SPDYCQ5MJ68 293 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 TAS1R3Q7RTX0 852 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 TARS2Q9BW92 718 aaKnown RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 HAPLN2Q9GZV7 340 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 KIAA1683Q9H0B3 1180 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 TRABDQ9H4I3 376 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 C15orf41Q9Y2V0 281 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 PDIA2Q13087 525 aaKnown RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 MTMR2Q13614 643 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 WDR44Q5JSH3 913 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 TLDC1Q6P9B6 456 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 ROPN1BQ9BZX4 212 aaPredicted RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 ROPN1Q9HAT0 212 aaPredicted RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 CDH16O75309 829 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 ENTPD5O75356 428 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 PDHA1P08559 390 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 WEE2P0C1S8 567 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 GCAP28676 217 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 NCKAP1LP55160 1127 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 MAP4K3Q8IVH8 894 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 GPD1LQ8N335 351 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 POLR3FQ9H1D9 316 aaPredicted RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
SQLE-201ENST00000265896 CHKBQ9Y259 395 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 NUB1Q9Y5A7 615 aa17.79■□□□□ 0.44
SQLE-201ENST00000265896 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 MTA2O94776 668 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 GALNTL6Q49A17 601 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 EAPPQ56P03 285 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 FMNL3Q8IVF7 1028 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 CCDC60Q8IWA6 550 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 TMEM109Q9BVC6 243 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 ATP6V0A4Q9HBG4 840 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 FAM47DPA6NHR8 397 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 WDR64B1ANS9 1081 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 P4HA2O15460 535 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 PROSCO94903 275 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 GM2AP17900 193 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 HSD17B4P51659 736 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 NFX1Q12986 1120 aaKnown RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 ZNF268Q14587 947 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 NLRX1Q86UT6 975 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 CCDC33Q8N5R6 958 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 C12orf50Q8NA57 414 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 P3H4Q92791 437 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 PRR11Q96HE9 360 aaPredicted RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 PLCD4Q9BRC7 762 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
SQLE-201ENST00000265896 CCDC134Q9H6E4 229 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 RXFP1Q9HBX9 757 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 UBN1Q9NPG3 1134 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 XPNPEP1Q9NQW7 623 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
SQLE-201ENST00000265896 EDN1P05305 212 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 KRT4P19013 534 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 GDF10P55107 478 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 OGDHQ02218 1023 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 FSTL1Q12841 308 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 PRKG1Q13976 671 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 ANKRD22Q5VYY1 191 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 PDCD2LQ9BRP1 358 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 PCSK1NQ9UHG2 260 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 CNTNAP1P78357 1384 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 ATP8B3O60423 1300 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 VNN1O95497 513 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 CST3P01034 146 aaPredicted RBP17.77■□□□□ 0.44
SQLE-201ENST00000265896 GSTA1P08263 222 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 MAPTP10636 758 aaKnown RBP17.77■□□□□ 0.44
SQLE-201ENST00000265896 ADRA1DP25100 572 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 GBP1P32455 592 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 KLF1Q13351 362 aaPredicted RBP17.77■□□□□ 0.44
SQLE-201ENST00000265896 TFDP1Q14186 410 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 EMC1Q8N766 993 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 L3MBTL3Q96JM7 780 aaPredicted RBP17.77■□□□□ 0.44
SQLE-201ENST00000265896 TCHPQ9BT92 498 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 METTL5Q9NRN9 209 aaKnown RBP17.77■□□□□ 0.44
SQLE-201ENST00000265896 EXOC7Q9UPT5 735 aa17.77■□□□□ 0.44
SQLE-201ENST00000265896 KIF13BQ9NQT8 1826 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms