RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SEPT4O43236 478 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 CEP104O60308 925 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 KPNA6O60684 536 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
VPS26A-201ENST00000263559 NSFP46459 744 aaKnown RBP16.87■□□□□ 0.29
VPS26A-201ENST00000263559 VSNL1P62760 191 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 MESDQ14696 234 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 C11orf63Q6NUN7 778 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 CAPNS2Q96L46 248 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 SCN10AQ9Y5Y9 1956 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 TMEM110-MUSTN1A8MSY1 372 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 RAP1GAPP47736 663 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 NOMO3P69849 1222 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 SP3Q02447 781 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 BRD3Q15059 726 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 C2CD6Q53TS8 623 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 CC2D1AQ6P1N0 951 aaPredicted RBP16.87■□□□□ 0.29
VPS26A-201ENST00000263559 TRIM72Q6ZMU5 477 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 BTBD6Q96KE9 485 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 SELENOOQ9BVL4 669 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
VPS26A-201ENST00000263559 RNF186Q9NXI6 227 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 UVRAGQ9P2Y5 699 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 HES2Q9Y543 173 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 CASP8AP2Q9UKL3 1982 aa16.87■□□□□ 0.29
VPS26A-201ENST00000263559 CCDC151A5D8V7 595 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 POLR2BP30876 1174 aaKnown RBP16.86■□□□□ 0.29
VPS26A-201ENST00000263559 CDH8P55286 799 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
VPS26A-201ENST00000263559 NME8Q8N427 588 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 BCO2Q9BYV7 579 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 DPP3Q9NY33 737 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 AGAP1Q9UPQ3 857 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 RARBP10826 455 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 RRM1P23921 792 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 CRYBB1P53674 252 aaPredicted RBP16.86■□□□□ 0.29
VPS26A-201ENST00000263559 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 MON1BQ7L1V2 547 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 PHLDB2Q86SQ0 1253 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 CD302Q8IX05 232 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 ACTRT1Q8TDG2 376 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 SDCBP2Q9H190 292 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 SPC25Q9HBM1 224 aa16.86■□□□□ 0.29
VPS26A-201ENST00000263559 ELNP15502 786 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 AXLP30530 894 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 ATICP31939 592 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 RALGAPA2Q2PPJ7 1873 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 PLEKHA5Q9HAU0 1116 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 ITGA11Q9UKX5 1188 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 ZRANB2O95218 330 aaKnown RBP eCLIP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 COMTP21964 271 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 CCND3P30281 292 aaPredicted RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 MRPS25P82663 173 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 TFAP2BQ92481 460 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 HPDLQ96IR7 371 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 ZMAT2Q96NC0 199 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 TRIM6Q9C030 488 aaPredicted RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 NXF3Q9H4D5 531 aaKnown RBP16.85■□□□□ 0.29
VPS26A-201ENST00000263559 VRTNQ9H8Y1 702 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 GTF2IRD1Q9UHL9 959 aa16.85■□□□□ 0.29
VPS26A-201ENST00000263559 ADAMTS4O75173 837 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 TUBBP07437 444 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 MYBL1P10243 752 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 DCAF12L1Q5VU92 463 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 CPNE8Q86YQ8 564 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 RASGEF1CQ8N431 466 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 TRIM11Q96F44 468 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 FAXDC2Q96IV6 333 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 SNX27Q96L92 541 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 RPS6KC1Q96S38 1066 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 C11orf70Q9BRQ4 267 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 SMYD3Q9H7B4 428 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 ARFGAP3Q9NP61 516 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 AVENQ9NQS1 362 aaPredicted RBP16.84■□□□□ 0.29
VPS26A-201ENST00000263559 ZMYND10O75800 440 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 NKX3-2P78367 333 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 RBP5P82980 135 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 GDF6Q6KF10 455 aaPredicted RBP16.84■□□□□ 0.29
VPS26A-201ENST00000263559 TAF2Q6P1X5 1199 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 HDAC7Q8WUI4 952 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
VPS26A-201ENST00000263559 CELF4Q9BZC1 486 aaKnown RBP16.84■□□□□ 0.29
VPS26A-201ENST00000263559 XPNPEP3Q9NQH7 507 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 ADAM22Q9P0K1 906 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
VPS26A-201ENST00000263559 AKAP5P24588 427 aa16.83■□□□□ 0.29
VPS26A-201ENST00000263559 YARSP54577 528 aaKnown RBP16.83■□□□□ 0.29
VPS26A-201ENST00000263559 CCDC70Q6NSX1 233 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms