RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 INTUQ9ULD6 942 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 PAXBP1Q9Y5B6 917 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 CEP350Q5VT06 3117 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 ZNF623O75123 536 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 MMEP08473 750 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 ITGA4P13612 1032 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 TAF3Q5VWG9 929 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 SCARA5Q6ZMJ2 495 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 ZNF677Q86XU0 584 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 PCDHB18PQ96TA0 734 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 R3HCC1Q9Y3T6 440 aaKnown RBP24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 ANO9A1A5B4 782 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 BTNL10A8MVZ5 291 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 PTGESO14684 152 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 XPOTO43592 962 aaKnown RBP24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 WEE2P0C1S8 567 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 CYP3A5P20815 502 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 YWHAEP62258 255 aaKnown RBP24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 SLC35F6Q8N357 371 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 LRRC52Q8N7C0 313 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 SECISBP2LQ93073 1101 aaKnown RBP24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 ARMC5Q96C12 935 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 RNF19AQ9NV58 838 aa24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 SEPT11Q9NVA2 429 aaKnown RBP24.5■■□□□ 1.51
SMARCB1-201ENST00000263121 MACROD2A1Z1Q3 448 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 MEIS3P2A8K0S8 358 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 CALCAP01258 141 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 H2AFZP0C0S5 128 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 SELPP16109 830 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 H2AFVQ71UI9 128 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 LRRC8DQ7L1W4 858 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 DNAAF5Q86Y56 855 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 ADAM2Q99965 735 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 SDCBP2Q9H190 292 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 CYP3A43Q9HB55 503 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 TAS2R14Q9NYV8 317 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 SALL4Q9UJQ4 1053 aa24.49■■□□□ 1.51
SMARCB1-201ENST00000263121 A0A0U1RQF3 1178 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 PPEF2O14830 753 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 GZMAP12544 262 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 P4HA1P13674 534 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 CD58P19256 250 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 CASQ1P31415 396 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 MYO1EQ12965 1108 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 BFSP2Q13515 415 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 C9orf57Q5W0N0 161 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 PPP1R10Q96QC0 940 aaKnown RBP24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 ISCUQ9H1K1 167 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 SMYD3Q9H7B4 428 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 GIT1Q9Y2X7 761 aa24.48■■□□□ 1.51
SMARCB1-201ENST00000263121 GALCP54803 685 aa24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 SOX4Q06945 474 aaPredicted RBP24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 AGMOQ6ZNB7 445 aa24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 RNF10Q8N5U6 811 aaKnown RBP24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 GSTCDQ8NEC7 633 aa24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 ZFP42Q96MM3 310 aa24.47■■□□□ 1.51
SMARCB1-201ENST00000263121 TMCO5BA8MYB1 307 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 PIRO00625 290 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 TLR3O15455 904 aaKnown RBP24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 ATF7P17544 494 aaPredicted RBP24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 GNA15P30679 374 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 RAP1GAPP47736 663 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 PKN2Q16513 984 aaKnown RBP24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 LPPQ93052 612 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 FAM124BQ9H5Z6 455 aaPredicted RBP24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 PITPNM1O00562 1244 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 TFRCP02786 760 aaKnown RBP24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 TMEM253P0C7T8 217 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 SKIP12755 728 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 MLH1P40692 756 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 CDH8P55286 799 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 ANKRD33Q7Z3H0 272 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 CAPN6Q9Y6Q1 641 aa24.46■■□□□ 1.51
SMARCB1-201ENST00000263121 SCN1AP35498 2009 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 RTN2O75298 545 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 MOCS3O95396 460 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 LRPAP1P30533 357 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 LBX1P52954 281 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 TNNC1P63316 161 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 SLC39A5Q6ZMH5 540 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 GAD1Q99259 594 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 RGS18Q9NS28 235 aa24.45■■□□□ 1.5
SMARCB1-201ENST00000263121 NCANO14594 1321 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 A0A0A6YYK5 440 aaPredicted RBP24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 ANKRD62A6NC57 917 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 ARL5CA6NH57 179 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 PQBP1O60828 265 aaKnown RBP24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 CLEC16AQ2KHT3 1053 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 TRIM58Q8NG06 486 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 NOX5Q96PH1 765 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 SLC38A7Q9NVC3 462 aa24.44■■□□□ 1.5
SMARCB1-201ENST00000263121 CILPO75339 1184 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 TACC1O75410 805 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 FTLP02792 175 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 COL6A1P12109 1028 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 INCA1Q0VD86 236 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 GPNMBQ14956 572 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ZNF598Q86UK7 904 aaKnown RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 RTN4RL1Q86UN2 441 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ECHDC2Q86YB7 292 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms