RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 POLE2P56282 527 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 SETDB1Q15047 1291 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 HHATQ5VTY9 493 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 C11orf63Q6NUN7 778 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 TMEM270Q6UE05 265 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 EFCAB3Q8N7B9 438 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 ZNF526Q8TF50 670 aaPredicted RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 CNOT7Q9UIV1 285 aaKnown RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 SERPINA10Q9UK55 444 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 SRRM3A6NNA2 597 aaPredicted RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 SMIM24O75264 130 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 GAS8O95995 478 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 GSTA1P08263 222 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 TNNI1P19237 187 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 CCND1P24385 295 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 MXRA7P84157 204 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 RCN2Q14257 317 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 MUM1Q2TAK8 710 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 CYP4A22Q5TCH4 519 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 LRRC8CQ8TDW0 803 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 ZBTB45Q96K62 511 aaPredicted RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 TOP3BO95985 862 aaKnown RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 TFDP1Q14186 410 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 MTFR1Q15390 333 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 TMEM154Q6P9G4 183 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 ASRGL1Q7L266 308 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 ZC3H18Q86VM9 953 aaKnown RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 FMNL3Q8IVF7 1028 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 HIPK4Q8NE63 616 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 MIPEPQ99797 713 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 STMN4Q9H169 189 aaPredicted RBP13.76□□□□□ -0.21
SNX1-201ENST00000261889 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 NEU2Q9Y3R4 380 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
SNX1-201ENST00000261889 F8VP50 259 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 SGK1O00141 431 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 FAM155BO75949 473 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 GCAP28676 217 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 ANKRD22Q5VYY1 191 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 OTOAQ7RTW8 1153 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 CDR2LQ86X02 465 aaPredicted RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 FAM71AQ8IYT1 594 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 TTC17Q96AE7 1141 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 MBOAT7Q96N66 472 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 ZWILCHQ9H900 591 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 LARSQ9P2J5 1176 aaKnown RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 ANKFY1Q9P2R3 1169 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 TJP2Q9UDY2 1190 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 PEX10O60683 326 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 CNGA1P29973 690 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 IL9RQ01113 521 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 RCN1Q15293 331 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 ARHGEF18Q6ZSZ5 1173 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 MECRQ9BV79 373 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 OSBPL8Q9BZF1 889 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 EIF3DO15371 548 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNX1-201ENST00000261889 DRG2P55039 364 aaKnown RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 ZBTB16Q05516 673 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 SEPT7Q16181 437 aaKnown RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 MSS51Q4VC12 460 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 FAXCQ5TGI0 409 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 RHBDF2Q6PJF5 856 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 MFSD7Q6UXD7 560 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 TRMT10CQ7L0Y3 403 aaKnown RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 WDR60Q8WVS4 1066 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 SLC7A6OSQ96CW6 309 aaPredicted RBP13.75□□□□□ -0.21
SNX1-201ENST00000261889 NT5C1BQ96P26 610 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 SERPINB12Q96P63 405 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 TEKT3Q9BXF9 490 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 SPON1Q9HCB6 807 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 ARL8BQ9NVJ2 186 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 PRKAG3Q9UGI9 489 aa13.75□□□□□ -0.21
SNX1-201ENST00000261889 TCRBV7S3A2A0A539 114 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 AVILO75366 819 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 USP1O94782 785 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 GNAT1P11488 350 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 RARRES1P49788 294 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 GDF10P55107 478 aa13.74□□□□□ -0.21
SNX1-201ENST00000261889 STRN3Q13033 797 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms