RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 C3orf58Q8NDZ4 430 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 FAM81BQ96LP2 452 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 PI4K2AQ9BTU6 479 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 PLCB1Q9NQ66 1216 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 MSRAQ9UJ68 235 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 ADAM28Q9UKQ2 775 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 SIK3Q9Y2K2 1263 aa25.76■■□□□ 1.71
CDK2AP1-201ENST00000261692 LCHNA4D1U4 455 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 AARSP49588 968 aaKnown RBP eCLIP25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 TNNC1P63316 161 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 SCARA3Q6AZY7 606 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 RABGGTAQ92696 567 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 MRFAP1L1Q96HT8 127 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 PDLIM2Q96JY6 352 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 GDAP2Q9NXN4 497 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 APEX2Q9UBZ4 518 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 DAAM1Q9Y4D1 1078 aa25.75■■□□□ 1.71
CDK2AP1-201ENST00000261692 LINC01553A4QN01 128 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 RFX1P22670 979 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 MSNP26038 577 aaKnown RBP25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 ELAVL2Q12926 359 aaKnown RBP25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 LSM14BQ9BX40 385 aaKnown RBP25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 PBX4Q9BYU1 374 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 NIF3L1Q9GZT8 377 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 STK39Q9UEW8 545 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 SF3B1O75533 1304 aaKnown RBP eCLIP25.74■■□□□ 1.712e-14■■■■■ 172.3
CDK2AP1-201ENST00000261692 CA3P07451 260 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 LINC00271P0C7V0 271 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 TBXAS1P24557 533 aaPredicted RBP25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 PBX1P40424 430 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 PBX3P40426 434 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 ZNF75DP51815 510 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 TERF1P54274 439 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 TMEM169Q96HH4 297 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 IGSF21Q96ID5 467 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 SAMD11Q96NU1 681 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 MARCH5Q9NX47 278 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 SPG21Q9NZD8 308 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 SNX9Q9Y5X1 595 aa25.74■■□□□ 1.71
CDK2AP1-201ENST00000261692 NT5C1B-RDH14C9J2C7 533 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 LRRN2O75325 713 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 SPOPLQ6IQ16 392 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 DSTYKQ6XUX3 929 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 SLC39A11Q8N1S5 342 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 NEK11Q8NG66 645 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 HASPINQ8TF76 798 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 PLVAPQ9BX97 442 aa25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 APOBEC3GQ9HC16 384 aaKnown RBP25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 NXF1Q9UBU9 619 aaKnown RBP25.73■■□□□ 1.71
CDK2AP1-201ENST00000261692 ITIH6Q6UXX5 1313 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 LAMA3Q16787 3333 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 SPTLC1O15269 473 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 MYOGP15173 224 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 TRIM21P19474 475 aaKnown RBP25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 SMAD3P84022 425 aaKnown RBP25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 GCNT1Q02742 428 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 LRMPQ12912 555 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 CD300LGQ6UXG3 332 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 ENOSF1Q7L5Y1 443 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 DPH6Q7L8W6 267 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 PPM1KQ8N3J5 372 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 IQCDQ96DY2 449 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 SUSD3Q96L08 255 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 FAM207AQ9NSI2 230 aaPredicted RBP25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 FBXL5Q9UKA1 691 aa25.72■■□□□ 1.71
CDK2AP1-201ENST00000261692 HUS1O60921 280 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 ITGB1P05556 798 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 BMPR1AP36894 532 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 TIGD5Q53EQ6 642 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 KLHDC7AQ5VTJ3 777 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 TOP6BLQ8N6T0 577 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 SENP8Q96LD8 212 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 MMS19Q96T76 1030 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 NUP58Q9BVL2 599 aa25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 FAM124BQ9H5Z6 455 aaPredicted RBP25.71■■□□□ 1.71
CDK2AP1-201ENST00000261692 F8W810 466 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 M0QZQ0 153 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 ODC1P11926 461 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 KLK7P49862 253 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 KRT17Q04695 432 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 PRPF38BQ5VTL8 546 aaKnown RBP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 SPECC1LQ69YQ0 1117 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 PHLDB3Q6NSJ2 640 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 FUT10Q6P4F1 479 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 TMEM173Q86WV6 379 aaPredicted RBP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 VSTM4Q8IW00 320 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 APPL2Q8NEU8 664 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 TATDN2Q93075 761 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 TGS1Q96RS0 853 aaKnown RBP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 CYP3A43Q9HB55 503 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 SIX2Q9NPC8 291 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 DSEQ9UL01 958 aa25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 YBX2Q9Y2T7 364 aaKnown RBP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.7■■□□□ 1.71
CDK2AP1-201ENST00000261692 CYB561D2O14569 222 aa25.7■■□□□ 1.7
CDK2AP1-201ENST00000261692 ADCY5O95622 1261 aa25.7■■□□□ 1.7
CDK2AP1-201ENST00000261692 RB1P06400 928 aa25.7■■□□□ 1.7
CDK2AP1-201ENST00000261692 FAM163BP0C2L3 166 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms