RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GPS1Q13098 491 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 KPNB1Q14974 876 aaKnown RBP16.85■□□□□ 0.29
LMNB1-201ENST00000261366 CCDC89Q8N998 374 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 PHC3Q8NDX5 983 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 C10orf82Q8WW14 230 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 OSBPL8Q9BZF1 889 aa16.85■□□□□ 0.29
LMNB1-201ENST00000261366 FBXO6Q9NRD1 293 aaPredicted RBP16.85■□□□□ 0.29
LMNB1-201ENST00000261366 IPO5O00410 1097 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 WFS1O76024 890 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 FDX1P10109 184 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 TCF4P15884 667 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 PAPOLAP51003 745 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 SOX10P56693 466 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 GAD2Q05329 585 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 CCDC15Q0P6D6 951 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 SNRNP35Q16560 246 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 NFIL3Q16649 462 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 MAPK6Q16659 721 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 C11orf91Q3C1V1 193 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 MKL1Q969V6 931 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 DDX27Q96GQ7 796 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 CCDC17Q96LX7 622 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 DDX50Q9BQ39 737 aaKnown RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 DNPEPQ9ULA0 475 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ZBED4O75132 1171 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 APBA3O96018 575 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ARSEP51690 589 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 CCNG1P51959 295 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ZBTB16Q05516 673 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 SYCP2LQ5T4T6 812 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 ZNF75CPQ92670 426 aaPredicted RBP16.84■□□□□ 0.29
LMNB1-201ENST00000261366 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
LMNB1-201ENST00000261366 MARK3P27448 753 aa16.83■□□□□ 0.29
LMNB1-201ENST00000261366 RBBP5Q15291 538 aaKnown RBP16.83■□□□□ 0.29
LMNB1-201ENST00000261366 HELQQ8TDG4 1101 aa16.83■□□□□ 0.29
LMNB1-201ENST00000261366 CFAP57Q96MR6 1250 aa16.83■□□□□ 0.29
LMNB1-201ENST00000261366 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.29
LMNB1-201ENST00000261366 CAPN9O14815 690 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SNUPNO95149 360 aaKnown RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 MMP10P09238 476 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 PPP2R5CQ13362 524 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 MDH1BQ5I0G3 518 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 FAM102BQ5T8I3 360 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SNX30Q5VWJ9 437 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 MIER3Q7Z3K6 550 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 TEX9Q8N6V9 391 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SLCO2A1Q92959 643 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 CADM1Q9BY67 442 aaKnown RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 ARL8BQ9NVJ2 186 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 STK24Q9Y6E0 443 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 LIN7AO14910 233 aaPredicted RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 ATP5HO75947 161 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SP100P23497 879 aaPredicted RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 PDIA2Q13087 525 aaKnown RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 PDK4Q16654 411 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 CLEC16AQ2KHT3 1053 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 CLNKQ7Z7G1 428 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 SLC9A9Q8IVB4 645 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 KIFAP3Q92845 792 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 COA1Q9GZY4 146 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 CPSF2Q9P2I0 782 aaKnown RBP16.83■□□□□ 0.28
LMNB1-201ENST00000261366 HEY2Q9UBP5 337 aa16.83■□□□□ 0.28
LMNB1-201ENST00000261366 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 SSTR1P30872 391 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 CRKP46108 304 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 RASSF2P50749 326 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 MRPS35P82673 323 aaKnown RBP16.82■□□□□ 0.28
LMNB1-201ENST00000261366 CAV1Q03135 178 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 KRT39Q6A163 491 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 SPOPLQ6IQ16 392 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 LRRC6Q86X45 466 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 MCOLN2Q8IZK6 566 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 DENND1AQ8TEH3 1009 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 NRG4Q8WWG1 115 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 SCG3Q8WXD2 468 aaKnown RBP16.82■□□□□ 0.28
LMNB1-201ENST00000261366 MCUR1Q96AQ8 359 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 ARMCX1Q9P291 453 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 SAE1Q9UBE0 346 aaPredicted RBP16.82■□□□□ 0.28
LMNB1-201ENST00000261366 ATP9AO75110 1047 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 UBTFL6P0CB48 400 aaPredicted RBP16.82■□□□□ 0.28
LMNB1-201ENST00000261366 PTPN4P29074 926 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 CETN2P41208 172 aa16.82■□□□□ 0.28
LMNB1-201ENST00000261366 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
LMNB1-201ENST00000261366 DYNLT1P63172 113 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms