RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GM2AP17900 193 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 GNA11P29992 359 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 GRIK4Q16099 956 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TEX2Q8IWB9 1127 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TDRD6O60522 2096 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 ESPNB1AK53 854 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 H3BQF6 201 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 SEPT4O43236 478 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 ERBB2P04626 1255 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 GLI1P08151 1106 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TXNP10599 105 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 MYCLP12524 364 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PRKCSHP14314 528 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 GNL2Q13823 731 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CHURC1Q8WUH1 139 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 SMOQ99835 787 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PKD1L1Q8TDX9 2849 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 EXPH5Q8NEV8 1989 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CACNA1EQ15878 2313 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 SMIM28A0A1B0GU29 152 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 GCLMP48507 274 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CLCNKBP51801 687 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 DLX2Q07687 328 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PDE4DQ08499 809 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 FAM26FQ5R3K3 315 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PPP1R26Q5T8A7 1209 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 FAM171BQ6P995 826 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 IQUBQ8NA54 791 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TADA1Q96BN2 335 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 NMUR1Q9HB89 426 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 ABCA7Q8IZY2 2146 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 I3L4J1 428 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SPINT1O43278 529 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 INHAP05111 366 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 CREB1P16220 341 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 DENND1BQ6P3S1 775 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SLF2Q8IX21 1173 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 PQLC3Q8N755 202 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GBP4Q96PP9 640 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 TMEM134Q9H6X4 195 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 IL21Q9HBE4 155 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ATP6V1DQ9Y5K8 247 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 NCKAP5O14513 1909 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ENC1O14682 589 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 DUSP11O75319 330 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SEC24AO95486 1093 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MBD3O95983 291 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GABRB2P47870 512 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GSCP56915 257 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 STK38Q15208 465 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 STX1AQ16623 288 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 RTP2Q5QGT7 225 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SYPL2Q5VXT5 272 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ABHD16BQ9H3Z7 469 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 CHST7Q9NS84 486 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ST14Q9Y5Y6 855 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MRFAP1Q9Y605 127 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 EML6Q6ZMW3 1958 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 A0A0U1RQS6 177 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 DENND3A2RUS2 1198 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GTPBP10A4D1E9 387 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 PIAS1O75925 651 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 KIF4AO95239 1232 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 B4GALNT4Q76KP1 1039 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SMAP1Q8IYB5 467 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 BRD8Q9H0E9 1235 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 SAE1Q9UBE0 346 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ITPR2Q14571 2701 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MTA2O94776 668 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 C7P10643 843 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 PBX2P40425 430 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GNAQP50148 359 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MRPL12P52815 198 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 HADHBP55084 474 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 MYLIPQ8WY64 445 aa6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 GAS2L1Q99501 681 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 TYW1Q9NV66 732 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-201ENST00000260810 PPFIA4O75335 1185 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MMP8P22894 467 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 NF2P35240 595 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PLA2G4AP47712 749 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 STAT5BP51692 787 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SAFBQ15424 915 aaKnown RBP eCLIP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ZNF648Q5T619 568 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SPECC1LQ69YQ0 1117 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 EFCAB12Q6NXP0 572 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MFSD6LQ8IWD5 586 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 RASGEF1CQ8N431 466 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 WFDC5Q8TCV5 224 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PXYLP1Q8TE99 480 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CYFIP2Q96F07 1278 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 DHTKD1Q96HY7 919 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MMP19Q99542 508 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PRMT1Q99873 361 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 POLR3FQ9H1D9 316 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 GULP1Q9UBP9 304 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms