RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 NOCTQ9UK39 431 aaKnown RBP19.04■□□□□ 0.64
CCDC115-201ENST00000259229 BZW2Q9Y6E2 419 aaKnown RBP19.04■□□□□ 0.64
CCDC115-201ENST00000259229 A0A087X0T9 212 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 CYP26A1O43174 497 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 FAM228BP0C875 321 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 EN2P19622 333 aaPredicted RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 ITGB8P26012 769 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 LRPAP1P30533 357 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 CYLC1P35663 651 aaPredicted RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 ZNF132P52740 706 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 WDR72Q3MJ13 1102 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 ZNF667Q5HYK9 610 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 SCARA5Q6ZMJ2 495 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 FMNL3Q8IVF7 1028 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 LRRC52Q8N7C0 313 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 SLC20A1Q8WUM9 679 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 SEPT8Q92599 483 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 APBB2Q92870 758 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 PGBD4Q96DM1 585 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 SMYD3Q9H7B4 428 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 TMEM39AQ9NV64 488 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 TRMT1Q9NXH9 659 aaKnown RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 TRIM43BA6NCK2 446 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 XPOTO43592 962 aaKnown RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 PARNO95453 639 aaKnown RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 GFPT1Q06210 699 aaPredicted RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 SLC47A2Q86VL8 602 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 CRIPAKQ8N1N5 446 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 RNF169Q8NCN4 708 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 LNX1Q8TBB1 728 aaPredicted RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 TRIM43Q96BQ3 446 aaPredicted RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 CACNG4Q9UBN1 327 aa19.03■□□□□ 0.64
CCDC115-201ENST00000259229 NXF1Q9UBU9 619 aaKnown RBP19.03■□□□□ 0.64
CCDC115-201ENST00000259229 DDX3XO00571 662 aaKnown RBP eCLIP19.02■□□□□ 0.643e-7■■■■□ 19.9
CCDC115-201ENST00000259229 ENPP3O14638 875 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 OFD1O75665 1012 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 EOMESO95936 686 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 CALCAP01258 141 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 CCDC175P0C221 793 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 USP8P40818 1118 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 RAP1GAPP47736 663 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 CYP27A1Q02318 531 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 SLC18A3Q16572 532 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 CLLU1OSQ5K130 101 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 SLC30A5Q8TAD4 765 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 DDX1Q92499 740 aaKnown RBP19.02■□□□□ 0.64
CCDC115-201ENST00000259229 RPS6KC1Q96S38 1066 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 UBN1Q9NPG3 1134 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 RRAGDQ9NQL2 400 aaPredicted RBP19.02■□□□□ 0.64
CCDC115-201ENST00000259229 CISHQ9NSE2 258 aa19.02■□□□□ 0.64
CCDC115-201ENST00000259229 COL4A6Q14031 1691 aa19.02■□□□□ 0.63
CCDC115-201ENST00000259229 TSC2P49815 1807 aa19.02■□□□□ 0.63
CCDC115-201ENST00000259229 TTC3P53804 2025 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.01■□□□□ 0.63
CCDC115-201ENST00000259229 KIAA0355O15063 1070 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 SPTLC1O15269 473 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 AKR1B10O60218 316 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 THP07101 528 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 WEE2P0C1S8 567 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 CYP11B1P15538 503 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 CHRNB2P17787 502 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 IBSPP21815 317 aaPredicted RBP19.01■□□□□ 0.63
CCDC115-201ENST00000259229 IGFBP6P24592 240 aaPredicted RBP19.01■□□□□ 0.63
CCDC115-201ENST00000259229 ANXA13P27216 316 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 FAM43BQ6ZT52 329 aaPredicted RBP19.01■□□□□ 0.63
CCDC115-201ENST00000259229 PALB2Q86YC2 1186 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 DEF6Q9H4E7 631 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 SLC38A7Q9NVC3 462 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 PCDH10Q9P2E7 1040 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 ADAMTS1Q9UHI8 967 aa19.01■□□□□ 0.63
CCDC115-201ENST00000259229 RCCD1A6NED2 376 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 CLSTN1O94985 981 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 CCDC172P0C7W6 258 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 KRT5P13647 590 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 CDH8P55286 799 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 SMYD5Q6GMV2 418 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 TMEM270Q6UE05 265 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 RBBP8NLQ8NC74 664 aaPredicted RBP19■□□□□ 0.63
CCDC115-201ENST00000259229 ELAC1Q9H777 363 aaKnown RBP19■□□□□ 0.63
CCDC115-201ENST00000259229 TMEM161AQ9NX61 479 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 TFR2Q9UP52 801 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 PCDHB4Q9Y5E5 795 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 B4GALT3O60512 393 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 ABL1P00519 1130 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 POMCP01189 267 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 FGFR1P11362 822 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 CD58P19256 250 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 ARHGAP25P42331 645 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 MYO1EQ12965 1108 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 GRIK3Q13003 919 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
CCDC115-201ENST00000259229 DEFB128Q7Z7B8 93 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 GLYCTKQ8IVS8 523 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 WHAMMQ8TF30 809 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 AGPAT1Q99943 283 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 HMGXB4Q9UGU5 601 aa19■□□□□ 0.63
CCDC115-201ENST00000259229 FNDC1Q4ZHG4 1894 aaPredicted RBP18.99■□□□□ 0.63
CCDC115-201ENST00000259229 TIMP1P01033 207 aa18.99■□□□□ 0.63
CCDC115-201ENST00000259229 FMO1Q01740 532 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms