RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 NRXN3Q9Y4C0 1643 aa9.77□□□□□ -0.84
COL21A1-201ENST00000244728 FAM86B1E9PN63 330 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RGPD8O14715 1765 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 BNIP3LO60238 219 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SNX3O60493 162 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 LCA5LO95447 670 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 CTSHP09668 335 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 FAM86B2P0C5J1 330 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 MRC1P22897 1456 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 COG7P83436 770 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SURF1Q15526 300 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 TKFCQ3LXA3 575 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 FAM102AQ5T9C2 384 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 KIAA1841Q6NSI8 718 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RWDD4Q6NW29 188 aaKnown RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RHOT1Q8IXI2 618 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 TEKT4Q8WW24 435 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 MTMR9Q96QG7 549 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RIT2Q99578 217 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 KLF6Q99612 283 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RXFP1Q9HBX9 757 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 UVRAGQ9P2Y5 699 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 AGAP1Q9UPQ3 857 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 PPFIA2O75334 1257 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 KITP10721 976 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 CYP2B6P20813 491 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 MAGEA4P43358 317 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 FNTAP49354 379 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 ARL4CP56559 192 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 XRCC4Q13426 336 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 C1orf146Q5VVC0 180 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 RAPH1Q70E73 1250 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 PDZD4Q76G19 769 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 TEX9Q8N6V9 391 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SHISA4Q96DD7 197 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SCINQ9Y6U3 715 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 LTN1O94822 1766 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 O00370 1275 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 FDX1P10109 184 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 KCNA3P22001 575 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 CASP5P51878 434 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 NCOA4Q13772 614 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 GRAMD1BQ3KR37 738 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 ANKRD20A2Q5SQ80 823 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 ANKRD20A1Q5TYW2 823 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 ST13P4Q8IZP2 240 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 CENPTQ96BT3 561 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 DNAJC19Q96DA6 116 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 MKNK1Q9BUB5 465 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 MOV10L1Q9BXT6 1211 aaKnown RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 TMEM117Q9H0C3 514 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 SMG5Q9UPR3 1016 aaKnown RBP9.77□□□□□ -0.85
COL21A1-201ENST00000244728 TMX2Q9Y320 296 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 NFAT5O94916 1531 aa9.77□□□□□ -0.85
COL21A1-201ENST00000244728 IQANK1A0A1B0GTG1 560 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 A8MXQ7 604 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 WNT10BO00744 389 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 TOM1L1O75674 476 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 RASSF9O75901 435 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 DDNO94850 711 aaPredicted RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 PGM1P36871 562 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 EMC2Q15006 297 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 DACT2Q5SW24 774 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 KRT35Q92764 455 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SMYD3Q9H7B4 428 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 TOPORSQ9NS56 1045 aaPredicted RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 FIS1Q9Y3D6 152 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 NEU2Q9Y3R4 380 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 MYO9BQ13459 2157 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 NID2Q14112 1375 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SPECC1L-ADORA2AF8WAN1 911 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 COPEO14579 308 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 CREB3O43889 395 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 NOL4O94818 638 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 ACTR2P61160 394 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 KCNA1Q09470 495 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 ORC1Q13415 861 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 IRF2BP2Q7Z5L9 587 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 PCGF5Q86SE9 256 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 TRIM42Q8IWZ5 723 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 AGBL3Q8NEM8 1001 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 RBM41Q96IZ5 413 aaKnown RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 TMEM237Q96Q45 408 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 CENPKQ9BS16 269 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 GLIS2Q9BZE0 524 aaPredicted RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 IFT122Q9HBG6 1241 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SENP1Q9P0U3 644 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 C19orf81C9J6K1 198 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 KIF3CO14782 793 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 CCDC22O60826 627 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 HUS1O60921 280 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 HLA-DRAP01903 254 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SH3BGRP55822 239 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms