RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 THEGQ9P2T0 379 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 DERAQ9Y315 318 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 A0A1B0GUA9 196 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 AMHP03971 560 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 GHRP10912 638 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 GZMAP12544 262 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 YWHAEP62258 255 aaKnown RBP14.17□□□□□ -0.14
SLIRP-201ENST00000238688 IGBP1P78318 339 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 PTK2Q05397 1052 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 AMHR2Q16671 573 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 TMEM132AQ24JP5 1023 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 FBXO47Q5MNV8 452 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 PHLDB3Q6NSJ2 640 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 RSPH3Q86UC2 560 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 GDPD5Q8WTR4 605 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 NLRP7Q8WX94 980 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 SCLT1Q96NL6 688 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 NOX5Q96PH1 765 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 ASB2Q96Q27 587 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 NAPGQ99747 312 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-201ENST00000238688 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
SLIRP-201ENST00000238688 RPF1Q9H9Y2 349 aaKnown RBP14.17□□□□□ -0.14
SLIRP-201ENST00000238688 UBE2TQ9NPD8 197 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-201ENST00000238688 NENFQ9UMX5 172 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 C2CD2Q9Y426 696 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 INSL6Q9Y581 213 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
SLIRP-201ENST00000238688 A0A087WZ62 844 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 DYNC1I1O14576 645 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 TNNC2P02585 160 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 PIK3CAP42336 1068 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ACOT2P49753 483 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 TCEAL1Q15170 157 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ALKBH5Q6P6C2 394 aaKnown RBP14.16□□□□□ -0.14
SLIRP-201ENST00000238688 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 RTN4RL1Q86UN2 441 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-201ENST00000238688 MICALL1Q8N3F8 863 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 HELQQ8TDG4 1101 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 TAS1R2Q8TE23 839 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 LINC01599Q8WXQ3 324 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF592Q92610 1267 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 APBB2Q92870 758 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 TGS1Q96RS0 853 aaKnown RBP14.16□□□□□ -0.14
SLIRP-201ENST00000238688 FDXACB1Q9BRP7 624 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-201ENST00000238688 C17orf80Q9BSJ5 609 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 SYT11Q9BT88 431 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 GPR88Q9GZN0 384 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 HAPLN2Q9GZV7 340 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 CDT1Q9H211 546 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ADAMTS10Q9H324 1103 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 NAGPAQ9UK23 515 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 JRKLQ9Y4A0 524 aa14.16□□□□□ -0.14
SLIRP-201ENST00000238688 PDCD11Q14690 1871 aaKnown RBP14.16□□□□□ -0.14
SLIRP-201ENST00000238688 ENPP3O14638 875 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF263O14978 683 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 CTIFO43310 598 aaKnown RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 STAU1O95793 577 aaKnown RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 HLA-DRAP01903 254 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 PLEKP08567 350 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 PRLRP16471 622 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ATICP31939 592 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 CRYBB1P53674 252 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 MRPS6P82932 125 aaKnown RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 TFF2Q03403 129 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 BIRC3Q13489 604 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 SGSM1Q2NKQ1 1148 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF569Q5MCW4 686 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF571Q7Z3V5 609 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 CRIPAKQ8N1N5 446 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 SLC30A5Q8TAD4 765 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ZBTB45Q96K62 511 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 RPGRIP1Q96KN7 1286 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 VRTNQ9H8Y1 702 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 RC3H2Q9HBD1 1191 aaKnown RBP14.15□□□□□ -0.14
SLIRP-201ENST00000238688 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 ADAMTS1Q9UHI8 967 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 MTUS1Q9ULD2 1270 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 GUCA1BQ9UMX6 200 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 CNTN6Q9UQ52 1028 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 XIRP2A4UGR9 3374 aa14.15□□□□□ -0.14
SLIRP-201ENST00000238688 BDP1A6H8Y1 2624 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 FNDC1Q4ZHG4 1894 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 A0A087X0T9 212 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 M0QZ92 97 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 TSPAN1O60635 241 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 PHACTR2O75167 634 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 GPR32O75388 356 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 UPP2O95045 317 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 SLU7O95391 586 aaKnown RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 ASS1P00966 412 aaKnown RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 EDN1P05305 212 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 H2AFZP0C0S5 128 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM191BP0C7N4 346 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 FAM228BP0C875 321 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms