RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 RAB27AP51159 221 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 RABGGTBP53611 331 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 STX17P56962 302 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 GSDMDP57764 484 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 CLDN10P78369 228 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 CETN1Q12798 172 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 PRPF4BQ13523 1007 aaKnown RBP10.03□□□□□ -0.8
TGFB3-201ENST00000238682 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 HACE1Q8IYU2 909 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 FIBCD1Q8N539 461 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 DBF4BQ8NFT6 615 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 CLP1Q92989 425 aaKnown RBP10.03□□□□□ -0.8
TGFB3-201ENST00000238682 MFSD14AQ96MC6 490 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 ERGIC2Q96RQ1 377 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
TGFB3-201ENST00000238682 ADPGKQ9BRR6 497 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 KCNH6Q9H252 994 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 PLEKHA5Q9HAU0 1116 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 PTPRHQ9HD43 1115 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
TGFB3-201ENST00000238682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.8
TGFB3-201ENST00000238682 KAT6AQ92794 2004 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 SFI1A8K8P3 1242 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 HNRNPDLO14979 420 aaKnown RBP10.02□□□□□ -0.8
TGFB3-201ENST00000238682 GPR182O15218 404 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 OGTO15294 1046 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.8
TGFB3-201ENST00000238682 CLCN3P51790 818 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 COPB1P53618 953 aaKnown RBP10.02□□□□□ -0.8
TGFB3-201ENST00000238682 NR1I3Q14994 352 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 CCDC40Q4G0X9 1142 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 VWA3BQ502W6 1294 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 C10orf67Q8IYJ2 551 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 FAM186BQ8IYM0 893 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 BICD1Q96G01 975 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 YME1L1Q96TA2 773 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 NSUN3Q9H649 340 aaKnown RBP10.02□□□□□ -0.8
TGFB3-201ENST00000238682 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.8
TGFB3-201ENST00000238682 GBF1Q92538 1859 aa10.02□□□□□ -0.8
TGFB3-201ENST00000238682 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 ERLIN2O94905 339 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 PMS1P54277 932 aaKnown RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 ELOAQ14241 798 aaKnown RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 PSMD6Q15008 389 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 ATF7IP2Q5U623 682 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 LEKR1Q6ZMV7 388 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 APTXQ7Z2E3 356 aaKnown RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 RC3H2Q9HBD1 1191 aaKnown RBP10.02□□□□□ -0.81
TGFB3-201ENST00000238682 HSPBP1Q9NZL4 362 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 MYO6Q9UM54 1294 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
TGFB3-201ENST00000238682 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 A0A1W2PQJ5 194 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 EXOC3O60645 756 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 SKILP12757 684 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 RRM1P23921 792 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 MTIF2P46199 727 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 DEFB103AP81534 67 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 PAK2Q13177 524 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 LPIN1Q14693 890 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 KRT31Q15323 416 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ZC2HC1CQ53FD0 456 aaPredicted RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 SYT10Q6XYQ8 523 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 NELFCDQ8IXH7 590 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 TMEM192Q8IY95 271 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 LRRC71Q8N4P6 559 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ZNF689Q96CS4 500 aaPredicted RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 FGFBP2Q9BYJ0 223 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ASB7Q9H672 318 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 UBN1Q9NPG3 1134 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ZNF446Q9NWS9 450 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 PUF60Q9UHX1 559 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 CDY2AQ9Y6F7 541 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 CLDN3O15551 220 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 CLTAP09496 248 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 SRGAP2BP0DMP2 458 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 NLRP11P59045 1033 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 MAEAQ7L5Y9 396 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 ARNTL2Q8WYA1 636 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 HPS3Q969F9 1004 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 UHRF1Q96T88 793 aaPredicted RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 MAPK8IP1Q9UQF2 711 aa10.01□□□□□ -0.81
TGFB3-201ENST00000238682 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
TGFB3-201ENST00000238682 MICAL3Q7RTP6 2002 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms