RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 FCARP24071 287 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 GBP1P32455 592 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 SOX9P48436 509 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 RARRES1P49788 294 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 KCNC4Q03721 635 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 FAM78AQ5JUQ0 283 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 VITQ6UXI7 678 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 ZBTB8OSQ8IWT0 167 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 CXCL16Q9H2A7 254 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 FZD8Q9H461 694 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 MTRRQ9UBK8 725 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
IFT43-201ENST00000238628 SLC38A8A6NNN8 435 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 CAPN9O14815 690 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 DCLK1O15075 740 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 MEFVO15553 781 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 TRAPPC3O43617 180 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 CDKL5O76039 1030 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 RECQL4O94761 1208 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 B3GAT3O94766 335 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 REC8O95072 547 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 LRG1P02750 347 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 CEBPBP17676 345 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 ATP2B1P20020 1258 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 ELF1P32519 619 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 MAPK8P45983 427 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 MLLT6P55198 1093 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 PRPF4BQ13523 1007 aaKnown RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 NAB2Q15742 525 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 FAM187BQ17R55 369 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 SLC5A9Q2M3M2 681 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 CCNI2Q6ZMN8 369 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 SYNPOQ8N3V7 929 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 ZNF461Q8TAF7 563 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 DEPDC1BQ8WUY9 529 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 ADPGKQ9BRR6 497 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 PDZD7Q9H5P4 517 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 C8orf33Q9H7E9 229 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 TTC12Q9H892 705 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 GPRC5CQ9NQ84 441 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 AVENQ9NQS1 362 aaPredicted RBP9.16□□□□□ -0.94
IFT43-201ENST00000238628 GJB4Q9NTQ9 266 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 GDAQ9Y2T3 454 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 BACE2Q9Y5Z0 518 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 FREM2Q5SZK8 3169 aa9.16□□□□□ -0.94
IFT43-201ENST00000238628 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 TMEM189-UBE2V1I3L0A0 370 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 ACKR2O00590 384 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 ZNF197O14709 1029 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 LIG1P18858 919 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 IGFBP6P24592 240 aaPredicted RBP9.15□□□□□ -0.94
IFT43-201ENST00000238628 TKTP29401 623 aaKnown RBP9.15□□□□□ -0.94
IFT43-201ENST00000238628 TXKP42681 527 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 CLCNKBP51801 687 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 FAM193AP78312 1265 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 SRSF1Q07955 248 aaKnown RBP eCLIP9.15□□□□□ -0.94
IFT43-201ENST00000238628 SCRN1Q12765 414 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 LMAN2Q12907 356 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 KARSQ15046 597 aaKnown RBP9.15□□□□□ -0.94
IFT43-201ENST00000238628 PON2Q15165 354 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 CALCRLQ16602 461 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 MAPK6Q16659 721 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 TXNDC11Q6PKC3 985 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.94
IFT43-201ENST00000238628 CYP2U1Q7Z449 544 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 PIP4P1Q86T03 277 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 YAF2Q8IY57 180 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 LSM14AQ8ND56 463 aaKnown RBP9.15□□□□□ -0.94
IFT43-201ENST00000238628 MCPH1Q8NEM0 835 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 CORO1BQ9BR76 489 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 C2orf40Q9H1Z8 148 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 USP20Q9Y2K6 914 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 NUP205Q92621 2012 aa9.15□□□□□ -0.94
IFT43-201ENST00000238628 PDCD11Q14690 1871 aaKnown RBP9.15□□□□□ -0.95
IFT43-201ENST00000238628 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 CAPN8A6NHC0 703 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 SPECC1L-ADORA2AF8WAN1 911 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 I3L4J1 428 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 NRG2O14511 850 aaPredicted RBP9.14□□□□□ -0.95
IFT43-201ENST00000238628 PRRG1O14668 218 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 DTNBO60941 627 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 ATG13O75143 517 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 ABLIM3O94929 683 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 NTRK1P04629 796 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 PRKCBP05771 671 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 KRT2P35908 639 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 VIPR2P41587 438 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 ABCG1P45844 678 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 BRCC3P46736 316 aa9.14□□□□□ -0.95
IFT43-201ENST00000238628 ARPP19P56211 112 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms