RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 PRPF31Q8WWY3 499 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF606Q8WXB4 792 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MCEEQ96PE7 176 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 KIF9Q9HAQ2 790 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF148Q9UQR1 794 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 AFG3L2Q9Y4W6 797 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 PROSCO94903 275 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 FSBPO95073 299 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.85
SYDE2-201ENST00000234668 GARTP22102 1010 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 HMGB2P26583 209 aaKnown RBP9.71□□□□□ -0.85
SYDE2-201ENST00000234668 CDH8P55286 799 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 OGDHQ02218 1023 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 SLMAPQ14BN4 828 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 PSMD6Q15008 389 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 P3H1Q32P28 736 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 WDR78Q5VTH9 848 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 NUGGCQ68CJ6 796 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 C15orf39Q6ZRI6 1047 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 FAM47EQ6ZV65 393 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 USP37Q86T82 979 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 ABRAQ8N0Z2 381 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 SLC7A3Q8WY07 619 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 SNF8Q96H20 258 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 TEX13BQ9BXU2 312 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 ACAD9Q9H845 621 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 NINJ2Q9NZG7 142 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 PARP2Q9UGN5 583 aa9.71□□□□□ -0.85
SYDE2-201ENST00000234668 KIF13BQ9NQT8 1826 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
SYDE2-201ENST00000234668 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 GGPS1O95749 300 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 BRAFP15056 766 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 CAPSQ13938 189 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 DCUN1D2Q6PH85 259 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 ATL2Q8NHH9 583 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 VTI1AQ96AJ9 217 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 PCYT2Q99447 389 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 TIPINQ9BVW5 301 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 ZWILCHQ9H900 591 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 CNOT10Q9H9A5 744 aaKnown RBP9.71□□□□□ -0.86
SYDE2-201ENST00000234668 KLC4Q9NSK0 619 aa9.71□□□□□ -0.86
SYDE2-201ENST00000234668 TTC4O95801 387 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 AGTP01019 485 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 OATP04181 439 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CYP1A1P04798 512 aaPredicted RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 KRT19P08727 400 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 GHRHRQ02643 423 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TCEAL1Q15170 157 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 E2F5Q15329 346 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TMED2Q15363 201 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 STXBP2Q15833 593 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 GNPTABQ3T906 1256 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TBC1D1Q86TI0 1168 aaPredicted RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 ANKMY2Q8IV38 441 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TMEM192Q8IY95 271 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CNPY4Q8N129 248 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TFAP2BQ92481 460 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CCT6BQ92526 530 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TMEM121Q9BTD3 319 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 SAYSD1Q9NPB0 183 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 RNF19AQ9NV58 838 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 NAALADL1Q9UQQ1 740 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PMM2O15305 246 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 B4GALT5O43286 388 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 GAS8O95995 478 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PAEPP09466 180 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CLTAP09496 248 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CD19P15391 556 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 SNRPFP62306 86 aaKnown RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CENPCQ03188 943 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 LIN9Q5TKA1 542 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 HIBCHQ6NVY1 386 aaPredicted RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 RHBDF2Q6PJF5 856 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 CATSPERGQ6ZRH7 1159 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PNMA8AQ86V59 439 aaPredicted RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 EMC1Q8N766 993 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 MORC4Q8TE76 937 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 TCP11Q8WWU5 503 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 COPS5Q92905 334 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.861e-6■■■■■ 30.1
SYDE2-201ENST00000234668 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PORCNQ9H237 461 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 C12orf65Q9H3J6 166 aaKnown RBP9.7□□□□□ -0.86
SYDE2-201ENST00000234668 PCSK1NQ9UHG2 260 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 POLIQ9UNA4 740 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 BRCA2P51587 3418 aa9.7□□□□□ -0.86
SYDE2-201ENST00000234668 LRRD1A4D1F6 860 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms