RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NOP14P78316 857 aaKnown RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 EFTUD2Q15029 972 aaKnown RBP eCLIP13.14□□□□□ -0.31
NUP88-201ENST00000225696 FAM182AQ5T1J6 154 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 CCDC89Q8N998 374 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 C10orf82Q8WW14 230 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.14□□□□□ -0.31
NUP88-201ENST00000225696 TXLNGQ9NUQ3 528 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 ACTL7BQ9Y614 415 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 A6NHS1 94 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 GOLGA8SH3BPF8 625 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 GOLGA8MH3BSY2 632 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 MAPK13O15264 365 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 KRT15P19012 456 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 CENPCQ03188 943 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 MAMLD1Q13495 774 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 TAF1BQ53T94 588 aaPredicted RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 MON1BQ7L1V2 547 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 OTOAQ7RTW8 1153 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 GRAMD1AQ96CP6 724 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 MIPEPQ99797 713 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
NUP88-201ENST00000225696 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 USH1CQ9Y6N9 552 aa13.14□□□□□ -0.31
NUP88-201ENST00000225696 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 WDR91A4D1P6 747 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 WFS1O76024 890 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 CA4P22748 312 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 MAN1A1P33908 653 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 CYP24A1Q07973 514 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 OVGP1Q12889 678 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ALCAMQ13740 583 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 SETDB1Q15047 1291 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 PDK4Q16654 411 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 MAPK6Q16659 721 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 TXNRD3NBQ6F5E7 133 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ZNF483Q8TF39 744 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 CCDC77Q9BR77 488 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 OSBPL1AQ9BXW6 950 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 YIPF3Q9GZM5 350 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 LRRC42Q9Y546 428 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 DPPA5A6NC42 116 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 TYROBPO43914 113 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ECE2O60344 883 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 CCNE2O96020 404 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 PDHA1P08559 390 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 SLC1A1P43005 524 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 ZBED8Q8IZ13 594 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 PRR11Q96HE9 360 aaPredicted RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 FAM213AQ9BRX8 229 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ST6GALNAC4Q9H4F1 302 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 VPS37BQ9H9H4 285 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
NUP88-201ENST00000225696 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
NUP88-201ENST00000225696 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUP88-201ENST00000225696 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 PRPF4O43172 522 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP88-201ENST00000225696 LIASO43766 372 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 CYP1A1P04798 512 aaPredicted RBP13.12□□□□□ -0.31
NUP88-201ENST00000225696 ABHD2P08910 425 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
NUP88-201ENST00000225696 ARSEP51690 589 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 GPS1Q13098 491 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 DGKZQ13574 1117 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
NUP88-201ENST00000225696 CTC1Q2NKJ3 1217 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms