RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 NFX1Q12986 1120 aaKnown RBP14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 TRIM72Q6ZMU5 477 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 RPAINQ86UA6 219 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CHD4Q14839 1912 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 EIF4E1BA6NMX2 242 aaKnown RBP14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CST8O60676 142 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 EGFRP00533 1210 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 SAT1P21673 171 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 PCK1P35558 622 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CDH6P55285 790 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MYBPC2Q14324 1141 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 VSIG10LQ86VR7 867 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MAP4K3Q8IVH8 894 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 MICAL1Q8TDZ2 1067 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 UBXN6Q9BZV1 441 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 CTNNAL1Q9UBT7 734 aa14.37□□□□□ -0.11
RAB3D-201ENST00000222120 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
RAB3D-201ENST00000222120 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
RAB3D-201ENST00000222120 RARGP13631 454 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 PEX19P40855 299 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 MAGEA4P43358 317 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 ERFP50548 548 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 JAM2P57087 298 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 R3HDM1Q15032 1099 aaKnown RBP14.36□□□□□ -0.11
RAB3D-201ENST00000222120 LY6KQ17RY6 165 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 C11orf63Q6NUN7 778 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 BSNDQ8WZ55 320 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 FAF2Q96CS3 445 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 HNRNPH1P31943 449 aaKnown RBP14.36□□□□□ -0.11
RAB3D-201ENST00000222120 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 TRMT10CQ7L0Y3 403 aaKnown RBP14.36□□□□□ -0.11
RAB3D-201ENST00000222120 CCDC33Q8N5R6 958 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 TMEM121Q9BTD3 319 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 AGAP1Q9UPQ3 857 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 A6NJR5 290 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 C19orf81C9J6K1 198 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 I3L4J1 428 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 IREB2P48200 963 aaKnown RBP14.36□□□□□ -0.11
RAB3D-201ENST00000222120 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 TMC2Q8TDI7 906 aa14.36□□□□□ -0.11
RAB3D-201ENST00000222120 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
RAB3D-201ENST00000222120 FOXO6A8MYZ6 492 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 H0Y3Z8 333 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CES2O00748 559 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 ZBED1O96006 694 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 ZSCAN5DPP0CG00 497 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 ABCD1P33897 745 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 FNTAP49354 379 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 ARL4CP56559 192 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 SKOR1P84550 965 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 SHC3Q92529 594 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CAPN9O14815 690 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CDH16O75309 829 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 GARTP22102 1010 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 RCN2Q14257 317 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 LGSNQ5TDP6 509 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 WNK4Q96J92 1243 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 MED10Q9BTT4 135 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 SAE1Q9UBE0 346 aaPredicted RBP14.35□□□□□ -0.11
RAB3D-201ENST00000222120 PCDHA3Q9Y5H8 950 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 UBR2Q8IWV8 1755 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 MYH15Q9Y2K3 1946 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CHUKO15111 745 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CDH8P55286 799 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 PPM1NQ8N819 430 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 ZNF606Q8WXB4 792 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CAV1Q03135 178 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 DNAJC3Q13217 504 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 HIF1AQ16665 826 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CATSPER4Q7RTX7 472 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 FAM167AQ96KS9 214 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 PPP1R12CQ9BZL4 782 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 CXorf56Q9H5V9 222 aa14.35□□□□□ -0.11
RAB3D-201ENST00000222120 BTNL10A8MVZ5 291 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 DDX3YO15523 660 aaKnown RBP14.34□□□□□ -0.11
RAB3D-201ENST00000222120 RIPK2O43353 540 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 SURF1Q15526 300 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 STMN2Q93045 179 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 ETNK1Q9HBU6 452 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 CD248Q9HCU0 757 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 FAM49BQ9NUQ9 324 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 RNF19AQ9NV58 838 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 PROSCO94903 275 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 GCKP35557 465 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 PTGER2P43116 358 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 SGSM1Q2NKQ1 1148 aa14.34□□□□□ -0.11
RAB3D-201ENST00000222120 FAXCQ5TGI0 409 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms