RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RUNDC3BQ96NL0 473 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 YME1L1Q96TA2 773 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 AGPAT1Q99943 283 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.81
CCDC113-201ENST00000219299 PIDD1Q9HB75 910 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 SEPT10Q9P0V9 454 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 PCSK1NQ9UHG2 260 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 TRPV2Q9Y5S1 764 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 FAM237AA0A1B0GTK4 181 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 ANKRD63C9JTQ0 380 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CALB1P05937 261 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 MAPTP10636 758 aaKnown RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SESN3P58005 492 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 ZBTB17Q13105 803 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CAPSQ13938 189 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SV2CQ496J9 727 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 LRRC23Q53EV4 343 aaPredicted RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CASC4Q6P4E1 433 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 ELMSAN1Q6PJG2 1045 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 RFX6Q8HWS3 928 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CCNYQ8ND76 341 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 GSDMBQ8TAX9 411 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 GRK7Q8WTQ7 553 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 MAGOHBQ96A72 148 aaKnown RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SUDS3Q9H7L9 328 aaPredicted RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 ABCB6Q9NP58 842 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SRRDQ9UH36 339 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 KIF1CO43896 1103 aaKnown RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 BAG2O95816 211 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 KRT1P04264 644 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 HOXC6P09630 235 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SDC4P31431 198 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 ITKQ08881 620 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 KCNA10Q16322 511 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SPATA2LQ8IUW3 424 aaPredicted RBP9.96□□□□□ -0.82
CCDC113-201ENST00000219299 SLAIN1Q8ND83 568 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 KLHL29Q96CT2 875 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 DPH5Q9H2P9 285 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 TRAF3IP3Q9Y228 551 aa9.96□□□□□ -0.82
CCDC113-201ENST00000219299 TYW5A2RUC4 315 aaKnown RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ARHGAP42A6NI28 874 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ZBTB22O15209 634 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 P4HA2O15460 535 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 GYPCP04921 128 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 LCP1P13796 627 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 PCSK1P29120 753 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ICAM3P32942 547 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 GNL1P36915 607 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 GRIK1P39086 918 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ORC1Q13415 861 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 NNTQ13423 1086 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 PSMD6Q15008 389 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 MTHFD1LQ6UB35 978 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 KCTD6Q8NC69 237 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 TMEM161BQ8NDZ6 487 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 CPA5Q8WXQ8 436 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ERGIC2Q96RQ1 377 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 SCOCQ9UIL1 159 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 STRIP2Q9ULQ0 834 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 SLC45A1Q9Y2W3 748 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 PCDHB2Q9Y5E7 798 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 LOC102724159A0A0B4J2E5 919 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 SLC10A3P09131 477 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 MYL6P60660 151 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 PWP2Q15269 919 aaKnown RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 TAF11Q15544 211 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ARSHQ5FYA8 562 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 NT5DC1Q5TFE4 455 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 NPLOC4Q8TAT6 608 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ELMO3Q96BJ8 720 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 HAUS1Q96CS2 278 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 FUCA2Q9BTY2 467 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 DUOX1Q9NRD9 1551 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 KLRC4O43908 158 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 CACNB2Q08289 660 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 VEPH1Q14D04 833 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 CD302Q8IX05 232 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 GAD1Q99259 594 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 DUSP9Q99956 384 aaKnown RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 FOXN3O00409 490 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 MDM2Q00987 491 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 NCAPHQ15003 741 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 SPOPLQ6IQ16 392 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
CCDC113-201ENST00000219299 TRIM59Q8IWR1 403 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 C18orf8Q96DM3 657 aa9.95□□□□□ -0.82
CCDC113-201ENST00000219299 TREHO43280 583 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 HEXIM1O94992 359 aaKnown RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 LYPLA2O95372 231 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 MCF2P10911 925 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PHBP35232 272 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms