RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 GAS7O60861 476 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 BCRP11274 1271 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 PLS3P13797 630 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 MXI1P50539 228 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 RPL7AP62424 266 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ICA1Q05084 483 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 MUM1Q2TAK8 710 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ANKRD22Q5VYY1 191 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 CES4AQ5XG92 561 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 NLRP9Q7RTR0 991 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 HELQQ8TDG4 1101 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ACER1Q8TDN7 264 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 FBF1Q8TES7 1133 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TSC22D3Q99576 134 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 C11orf70Q9BRQ4 267 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TMEM121Q9BTD3 319 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 AMNQ9BXJ7 453 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ROPN1BQ9BZX4 212 aaPredicted RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 VPS37BQ9H9H4 285 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ROPN1Q9HAT0 212 aaPredicted RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 WHRNQ9P202 907 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 DIS3Q9Y2L1 958 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 COL24A1Q17RW2 1714 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TCRBV7S3A2A0A539 114 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 EDF1O60869 148 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TOP3BO95985 862 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 GH2P01242 217 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 IFNB1P01574 187 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 CYP1A2P05177 515 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ATF7P17544 494 aaPredicted RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ATP6V1C1P21283 382 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 SERPINB3P29508 390 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 RBM5P52756 815 aaKnown RBP eCLIP6.18□□□□□ -1.423e-7■■□□□ 14.5
CEACAM1-201ENST00000161559 GDF10P55107 478 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 PEX3P56589 373 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 DYNLT1P63172 113 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 PPP2R5CQ13362 524 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 SPARCL1Q14515 664 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 LRRC36Q1X8D7 754 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ZFYVE27Q5T4F4 411 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 OR52E8Q6IFG1 317 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ARHGEF18Q6ZSZ5 1173 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 CLNKQ7Z7G1 428 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 ALYREFQ86V81 257 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 C12orf50Q8NA57 414 aaPredicted RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 SCG3Q8WXD2 468 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 DNAJC9Q8WXX5 260 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 FAM136AQ96C01 138 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 RUNDC3BQ96NL0 473 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TRIM56Q9BRZ2 755 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 WDR11Q9BZH6 1224 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 TAOK3Q9H2K8 898 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 PCMTD2Q9NV79 361 aa6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 G3BP2Q9UN86 482 aaKnown RBP6.18□□□□□ -1.42
CEACAM1-201ENST00000161559 UMODL1Q5DID0 1318 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 CAPN9O14815 690 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 EIF3DO15371 548 aaKnown RBP eCLIP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ATP9AO75110 1047 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 CDH16O75309 829 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 FAM155BO75949 473 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PYGLP06737 847 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ANXA13P27216 316 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 YARSP54577 528 aaKnown RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 STRN3Q13033 797 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 KLF1Q13351 362 aaPredicted RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PTK6Q13882 451 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 TFDP1Q14186 410 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 SEZ6Q53EL9 994 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 SNX30Q5VWJ9 437 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PADI6Q6TGC4 694 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 UPF1Q92900 1129 aaKnown RBP eCLIP6.17□□□□□ -1.423e-7■■■□□ 14.9
CEACAM1-201ENST00000161559 POLR3CQ9BUI4 534 aaPredicted RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 MECRQ9BV79 373 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 TRAIPQ9BWF2 469 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 STMN4Q9H169 189 aaPredicted RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ZFP69BQ9UJL9 534 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PRR12Q9ULL5 1215 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 GREB1LQ9C091 1923 aaPredicted RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PTPRJQ12913 1337 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 SERPINB2P05120 415 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ITGB5P18084 799 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ITIH2P19823 946 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 KLRC2P26717 231 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 PAPOLAP51003 745 aaKnown RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 CCNG1P51959 295 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 HADHBP55084 474 aaKnown RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 GPX6P59796 221 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 IL9RQ01113 521 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 GPS1Q13098 491 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 NR1H3Q13133 447 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 AP1ARQ63HQ0 302 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 SLC30A9Q6PML9 568 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 C4orf50Q6ZRC1 276 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 ZNF276Q8N554 614 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 EFCAB3Q8N7B9 438 aa6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 GBP7Q8N8V2 638 aaPredicted RBP6.17□□□□□ -1.42
CEACAM1-201ENST00000161559 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms