RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Dctn3Q9Z0Y1 186 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ttc30a2A2AKQ8 664 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mocs3A2BDX3 460 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 2610008E11RikG3X964 669 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 PdgfraP26618 1089 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tmc5Q32NZ6 967 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Scrn3Q3TMH2 418 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 McuQ3UMR5 350 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Rusc1Q8BG26 893 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Stx18Q8VDS8 334 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ttc30a1Q99J38 664 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ttc30bQ9CY00 664 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Fip1l1Q9D824 581 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Slc27a6E9Q9W4 619 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sec31aQ3UPL0 1230 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tnfaip2Q61333 691 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Olfml3Q8BK62 406 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ccdc137Q8R0K4 290 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Anapc4Q91W96 807 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Hspbp1Q99P31 357 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Scube2Q9JJS0 997 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm29276A0A087WNW5 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21117A0A087WPJ9 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm20820A0A087WPP3 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm20937A0A087WQA3 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21258A0A087WQC7 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm28102A0A087WQL3 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21095A0A087WR14 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm20792A0A087WRF5 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21865A0A087WRL2 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm28576A0A087WRP6 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm28490A0A087WRT9 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21294A0A087WS79 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm20824A0A087WS97 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21996A0A087WSS9 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm28870A0A0A6YW38 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm29866A0A0A6YX04 222 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Arhgef37A1IGU4 676 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Pnldc1B2RXZ1 531 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sema3fO88632 785 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Akap10O88845 662 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Hdac10Q6P3E7 666 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ms4a5Q810P8 197 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm21627Q810R0 219 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 A430089I19RikQ8C9W1 407 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Acsl4Q9QUJ7 711 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Nfe2l3Q9WTM4 660 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sema4dO09126 861 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cd22P35329 862 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 BegainQ68EF6 600 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 TiprlQ8BH58 271 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Wdr35Q8BND3 1181 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Pphln1Q8K2H1 381 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Trim31Q8R0K2 507 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 ChiaQ91XA9 473 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 PdynO35417 248 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sh3gl1Q62419 368 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tas2r131Q7M708 310 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cyp2s1Q9DBX6 501 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mup6A2AV72 179 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cd40lgP27548 260 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Q8BWG4 1187 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ints4Q8CIM8 964 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Yipf1Q91VU1 306 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Homer3Q99JP6 356 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Nkd1Q99MH6 471 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Actl7aQ9QY84 440 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Hcn2O88703 863 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tpp2Q64514 1262 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Usp50Q6P8X6 390 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Eya4Q9Z191 616 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 March10E9PX79 788 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Spag6Q3V0U9 509 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Peg10Q7TN75 958 aaKnown RBP13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Elp3Q9CZX0 547 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 C130060K24RikG3UWA8 416 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 ChrngP04760 519 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sdr16c6Q05A13 316 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Stx3Q64704 289 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Kcnv1Q8BZN2 503 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Trex1Q91XB0 314 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Apba1B2RUJ5 842 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Col6a1Q04857 1025 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ddx3yQ62095 658 aaKnown RBP13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 VclQ64727 1066 aaKnown RBP13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Spon2Q8BMS2 330 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Btbd7Q8CFE5 1130 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tmem134Q8R0J4 195 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Pglyrp2Q8VCS0 530 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Taf11Q99JX1 211 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tbk1Q9WUN2 729 aa13.09□□□□□ -0.31
Col6a3-208ENSMUST00000188587 4930469K13RikA0A286YDB2 92 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Clk2O35491 499 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Csn1s1P19228 313 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Zfy2P20662 777 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mif4gdQ3UBZ5 222 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Irak1Q62406 710 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Iqcf4Q6P8Y2 204 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ftsj1Q8CBC7 324 aa13.08□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ptgs2Q05769 604 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms