RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Cdc42ep4Q9JM96 349 aaKnown RBP13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Krt17Q9QWL7 433 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Kcnd2Q9Z0V2 630 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Myo15bI7HPW8 3033 aa13.28□□□□□ -0.28
Trim50-202ENSMUST00000111180 Plekhg4A0A1L1SU27 1217 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Zfp472B0V2W5 534 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Gcom1E9PZ54 550 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Zfp882E9Q4R4 555 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Vmn2r15L7N2A0 855 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Kcnu1O54982 1121 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Vmn2r1O70410 912 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Lamp2P17047 415 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Bmp8aP34821 399 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Usp10P52479 792 aaKnown RBP13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Actn4P57780 912 aaKnown RBP13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Mkl2P59759 1080 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 YwhaeP62259 255 aaKnown RBP13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 MyzapQ3UIJ9 466 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Ccdc42Q5SV66 316 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Dsg1aQ61495 1057 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Mpp4Q6P7F1 635 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Q6PD19 689 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tas2r134Q7TQB0 298 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tmem260Q8BMD6 703 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Ftsj1Q8CBC7 324 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Klhl36Q8R124 613 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 AdigQ8R400 80 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Unc93b1Q8VCW4 598 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 CarfQ8VHI4 689 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Q91Z58 1206 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Ergic2Q9CR89 377 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tmem86aQ9D8N3 241 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Abcb6Q9DC29 842 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Chst7Q9EP78 484 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Pdk2Q9JK42 407 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Trim10Q9WUH5 489 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cd97Q9Z0M6 818 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cdh23Q99PF4 3354 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 ThadaA8C756 1938 aa13.27□□□□□ -0.29
Trim50-202ENSMUST00000111180 Prdm12A2AJ77 365 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Trim30bE9PVL6 203 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 EgfP01132 1217 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 EmbP21995 330 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tmem232Q5K6N0 675 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cep70Q6IQY5 616 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Wdr3Q8BHB4 942 aaKnown RBP13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Smarcal1Q8BJL0 910 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Psmd5Q8BJY1 504 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Nrip1Q8CBD1 1161 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Gpc3Q8CFZ4 579 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cog3Q8CI04 820 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Gnl3Q8CI11 538 aaKnown RBP13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cd209bQ8CJ91 325 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Trim68Q8K243 485 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Dnajc28Q8VCE1 385 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Arl8aQ8VEH3 186 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Vmn1r65Q9EPS7 332 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Ddx21Q9JIK5 851 aaKnown RBP13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Efcab12V9GXH0 673 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 TrioQ0KL02 3102 aa13.26□□□□□ -0.29
Trim50-202ENSMUST00000111180 Myo16Q5DU14 1919 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 1700017N19RikA0A087WPJ1 469 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 IkbkbO88351 757 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Syn1O88935 706 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tbxas1P36423 533 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Gad1P48318 593 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cdc25cP48967 447 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Rnf113a2Q14B01 337 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Sppl2bQ3TD49 578 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Gzf1Q4VBD9 706 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Frmd5Q6P5H6 517 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Fhod1Q6P9Q4 1197 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Klhl17Q6TDP3 640 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Nucks1Q80XU3 234 aaKnown RBP13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Fam78aQ8C552 283 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Kat5Q8CHK4 513 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Scrn2Q8VCA8 425 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Olfr1499Q8VG65 314 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Fam133bQ9CVI2 245 aaKnown RBP13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Rnf138rt1Q9D9M9 248 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Tpcn1Q9EQJ0 817 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Extl1Q9JKV7 669 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Slc26a3Q9WVC8 757 aa13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.25□□□□□ -0.29
Trim50-202ENSMUST00000111180 Ttc17E9PVB5 1198 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Olfr552E9Q545 317 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Sclt1G5E861 688 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cyp17a1P27786 507 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cetn1P41209 172 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Nub1P54729 614 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Slc12a1P55014 1095 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 HmmrQ00547 794 aaKnown RBP13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Muc3aQ3U5A2 218 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Upf3bQ3ULL6 472 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Sec31aQ3UPL0 1230 aaKnown RBP13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Prss36Q5K2P8 849 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Myl6Q60605 151 aaKnown RBP13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 FdxrQ61578 494 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Cd300aQ6SJQ0 318 aa13.24□□□□□ -0.29
Trim50-202ENSMUST00000111180 Olfr1046Q7TR79 316 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms