RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Lrrc4bP0C192 709 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Fam167aQ6P1G6 215 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ano5Q75UR0 904 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Fubp1Q91WJ8 651 aaKnown RBP16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 CbsQ91WT9 561 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Pitpnm2Q6ZPQ6 1335 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Col14a1Q80X19 1797 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mindy4b-psA0A1W2P7H6 457 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Sdccag3A2AIW0 432 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 1700003F12RikA2AKE5 210 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ttc39dQ0VF76 604 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rnf10Q3UIW5 804 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Actl9Q8CG27 415 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Krt16Q9Z2K1 469 aa16.54■□□□□ 0.24
Clcn3-203ENSMUST00000093490 AfmO89020 608 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Kcnj6P48542 425 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Slc11a2P49282 568 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 FAM120AQ6A0A9 1112 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trim36Q80WG7 729 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Leng8Q8CBY3 785 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Cwf19l1Q8CI33 537 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ppp1r14cQ8R4S0 164 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mis18aQ9CZJ6 204 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Kansl3A2RSY1 903 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ass1P16460 412 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Scp2P32020 547 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Eif3eP60229 445 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trim43bP86448 445 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tfdp2Q64163 446 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Nxnl1Q8VC33 217 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 H2afxP27661 143 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Npr3P70180 536 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tmem120aQ8C1E7 343 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ano4Q8C5H1 955 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Proser2Q8C5R2 471 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 CntrobQ8CB62 887 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mageb3Q9D2H4 330 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Dgcr8Q9EQM6 773 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Cdk5rap2Q8K389 1822 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 4931408C20RikE9PWP9 1381 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Morc3F7BJB9 942 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mxi1P50540 228 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Amz1Q8BVF9 502 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tor1aip2Q8BYU6 502 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ccdc90bQ8C3X2 256 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Strip2Q8C9H6 844 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Klhl2Q8JZP3 593 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Slc13a3Q91Y63 600 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 NelfcdQ922L6 591 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Lsm7Q9CQQ8 103 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ddx56Q9D0R4 546 aaKnown RBP16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Bcl2l12Q9D3J3 255 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rab27aQ9ERI2 221 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trpm1Q2TV84 1622 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gm3187M0QWW3 260 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Sema4dO09126 861 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 LxnP70202 222 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Wdr41Q3UDP0 460 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mxd4Q60948 209 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Q8BGD0 127 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Vps37aQ8CHS8 397 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Med21Q9CQ39 144 aa16.53■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mpp3O88910 568 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rhbdl3P58873 404 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Atg9bQ6EBV9 922 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ces4aQ8R0W5 563 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Abcf2Q99LE6 628 aaKnown RBP16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 NfkbizQ9EST8 728 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Stk25Q9Z2W1 426 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Shank2Q80Z38 1476 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Spata31E9QAF0 1014 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ctnnal1O88327 731 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mtco1P00397 514 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tp53P02340 387 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 HelqQ2VPA6 1069 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ddx5Q61656 614 aaKnown RBP16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Atp4aQ64436 1033 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Acap2Q6ZQK5 770 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 HnrnprQ8VHM5 632 aaKnown RBP16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Nmrk1Q91W63 195 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trim12aQ99PQ1 284 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ubiad1Q9DC60 336 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Pdk2Q9JK42 407 aa16.52■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rexo5D3YW29 759 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tlk2O55047 718 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Actr2P61161 394 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pstpip1P97814 415 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Brd9Q3UQU0 596 aaKnown RBP16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mars2Q499X9 586 aaKnown RBP16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Lilrb4Q64281 335 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Lrrc8dQ8BGR2 859 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pi4kbQ8BKC8 816 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ifi205aQ8CGE8 404 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mtmr6Q8VE11 617 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rpn2Q9DBG6 631 aaKnown RBP16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Dnajc7Q9QYI3 494 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 4930444G20RikD3Z741 495 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Galnt5Q8C102 930 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Spice1Q8C804 860 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms