RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Hdhd2Q3UGR5 259 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ccdc33Q3ULW6 985 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ppp4r3cQ3V0Y1 813 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 E2f5Q61502 335 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 EsrrbQ61539 433 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Zic5Q7TQ40 622 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 AdalQ80SY6 360 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Pja2Q80U04 707 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 PolrmtQ8BKF1 1207 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Efl1Q8C0D5 1127 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Taf2Q8C176 1104 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Slc15a5Q8CBB2 566 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Epn2Q8CHU3 595 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Oit3Q8R4V5 546 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ppp1r16bQ8VHQ3 568 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Asb7Q91ZU0 318 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Smc6Q924W5 1097 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ddx47Q9CWX9 455 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Thumpd2Q9CZB3 528 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mrpl2Q9D773 306 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Cnot8Q9D8X5 292 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 IdeQ9JHR7 1019 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Actn2Q9JI91 894 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Fmnl1Q9JL26 1094 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 NagaQ9QWR8 415 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Pdzd4Q9QY39 772 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Pacsin2Q9WVE8 486 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Gadd45gQ9Z111 159 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 LctF8VPT3 1931 aa8.02□□□□□ -1.12
Trim40-201ENSMUST00000087158 Kiaa1522A2A7S8 1013 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Dpy19l4A2AJQ3 722 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Vmn2r87E9PZX4 848 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Zfpm1O35615 995 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tlk2O55047 718 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 PtprcP06800 1291 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rrm1P07742 792 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 PrphP15331 475 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ass1P16460 412 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ap1m1P35585 423 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ighmbp2P40694 993 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cetn1P41209 172 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tulp2P46686 562 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Hsd17b1P51656 344 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Oas1fQ14AZ4 364 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Fam107bQ3TGF2 131 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ppp1r12cQ3UMT1 782 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Mpzl3Q3V3F6 237 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ttf2Q5NC05 1138 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cyfip2Q5SQX6 1253 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Serpinb6Q60854 378 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ntan1Q64311 310 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Git1Q68FF6 770 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ssxb10Q6XAR7 170 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ccdc181Q80ZU5 509 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Q8BGD0 127 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rufy1Q8BIJ7 712 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rassf10Q8BL43 508 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ccdc15Q8C9M2 810 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cog3Q8CI04 820 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Pak2Q8CIN4 524 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Vopp1Q8R1C3 172 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 PhykplQ8R1K4 467 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 SfpqQ8VIJ6 699 aaKnown RBP8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ube2sQ921J4 223 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ndufab1Q9CR21 156 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Arhgap8Q9CXP4 425 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Kdm8Q9CXT6 414 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Zfyve19Q9DAZ9 389 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Scgb2b20Q9JI02 112 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 CenphQ9QYM8 241 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Znf394Q9Z1D9 521 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Syngap1F6SEU4 1340 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Arhgef10Q8C033 1345 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gm11985A0A1B0GS61 206 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Lrrc74aA0A1Y7VMD6 494 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 EloblA6PWE0 161 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gm6588E9Q3K0 461 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Pex5O09012 639 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cyp27b1O35084 507 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Birc5O70201 140 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Nr3c1P06537 783 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tnnc1P19123 161 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gjb1P28230 283 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 IppP28575 584 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Irs1P35569 1233 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ddr1Q03146 911 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Spink5Q148R4 1017 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Hexim2Q3TVI4 313 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Mphosph8Q3TYA6 858 aaKnown RBP8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Skap2Q3UND0 358 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Odr4Q4PJX1 447 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 OgdhQ60597 1023 aaKnown RBP8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Pick1Q62083 416 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tcp10aQ80W76 438 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Slc51bQ80WK2 128 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rhbdf2Q80WQ6 827 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rnf187Q8BFX1 236 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ublcp1Q8BGR9 318 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tor4aQ8BH02 426 aa8.02□□□□□ -1.13
Trim40-201ENSMUST00000087158 Klhl7Q8BUL5 586 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms