RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 RaraP11416 462 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Cct8P42932 548 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Idi1P58044 227 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Pdap1Q3UHX2 181 aaKnown RBP8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Dcaf5Q80T85 946 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 TwnkQ8CIW5 685 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Cse1lQ9ERK4 971 aaKnown RBP8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Plac9Q8K262 108 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Cnga3Q9JJZ8 631 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Adam17Q9Z0F8 827 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Gli2Q0VGT2 1544 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Veph1A1A535 833 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Mucl2P02815 138 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Pla2g4bP0C871 782 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Galnt3P70419 633 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Atg16l2Q6KAU8 623 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Tas2r109Q7M707 316 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Cyfip1Q7TMB8 1253 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Epb41l5Q8BGS1 731 aa8.54□□□□□ -1.04
Spen-201ENSMUST00000078886 Klhl32A2AJX0 620 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 ZfrO88532 1074 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Kcnb1Q03717 857 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Usp1Q8BJQ2 784 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Serpina3bQ8BYY9 420 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Inpp5bQ8K337 993 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Slc12a4Q9JIS8 1085 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tk2Q9R088 270 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Uggt2E9Q4X2 1504 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Hk2O08528 917 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 UrgcpQ5NCI0 926 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 EmsyQ8BMB0 1264 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tmem120aQ8C1E7 343 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Mkl1Q8K4J6 964 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Atp5c1Q91VR2 298 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Serpinb9bQ9DAV6 377 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 CsadQ9DBE0 493 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Anxa9Q9JHQ0 345 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tmem245B1AZA5 876 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Zfp277E9Q6D6 583 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Morc3F7BJB9 942 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 OmdO35103 423 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 CidebO70303 219 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tmem120bQ3TA38 339 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ankmy2Q3TPE9 440 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 9930111J21Rik1Q5SVP0 844 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ccdc17Q8CE13 565 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Actl9Q8CG27 415 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Q91WD4 421 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 PodxlQ9R0M4 503 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Vmn2r71L7N2D8 855 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Prkaa1Q5EG47 559 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 ItgaeQ60677 1167 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Hoxa13Q62424 386 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Papd5Q68ED3 633 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Abi1Q8CBW3 481 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Glt1d1A4FUP9 346 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Gm3371F7CQW8 167 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Lilrb4Q64281 335 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ces1dQ8VCT4 565 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Pcdhb11Q91UZ8 797 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Scrn1Q9CZC8 414 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Fam227aQ9D3V8 625 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Fam84aQ9D650 292 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Rassf7Q9DD19 359 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Psma4Q9R1P0 261 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Abcc2Q8VI47 1543 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Pabpc1lA2A5N3 607 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Hdac10Q6P3E7 666 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Hspa13Q8BM72 471 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Mb21d2Q8C525 428 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ddx39bQ9Z1N5 428 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Pdcd11Q6NS46 1862 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Col17a1Q07563 1470 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Gm5689F6Y2A6 97 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Gm3182K7N6T8 263 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 TbckQ8BM85 762 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Mtif2Q91YJ5 727 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Chmp1b1Q99LU0 199 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Clvs1Q9D4C9 354 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Kiaa1107Q80TK0 1369 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Myo10F8VQB6 2062 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Sult6b2B7ZWN4 290 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Orm2P07361 207 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Srp54P14576 504 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ccna2P51943 422 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Fam228bQ497Q6 232 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Ncoa4Q5U4H9 625 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Olfr293Q7TS10 336 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Q8BWQ6 963 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tmem206Q9D771 350 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Rpf2Q9JJ80 306 aaKnown RBP8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Klra10Q9R1G6 266 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Soat2O88908 525 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Hspa2P17156 633 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tatdn3Q3U1C6 294 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Rabl6Q5U3K5 725 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Rapgefl1Q68EF8 662 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Tbc1d12Q6A039 696 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Cpa5Q8R4H4 436 aa8.53□□□□□ -1.04
Spen-201ENSMUST00000078886 Rmnd5bQ91YQ7 393 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms